PUBLICATIONS

(* represents undergraduate students)

94. Channaveerappa, D., Aslebagh, R., Panama, B., Darie, C. C. Proteomics Analysis of atria from rats with obstructive sleep apnea and matched controls. Under Review.

93. Aslebagh, R., Channaveerappa, D., Arcaro, K.F., Darie, C. C. Mass Spectrometry-Based Proteomics of Human Milk to Identify Differentially Expressed Proteins in Women with Breast Cancer versus Controls. Under Review.

92. Dupree, E.J.,, Brimmins, B., Holsen, T., Darie, C.C. Proteomic analysis of the lake trout (Salvelinus namaycush) liver identifies proteins from evolutionarily-related and -distant fish relatives. Under Review.

91. Lux JC, Channaveerappa D, Aslebagh R, Heintz TA, McLerie M, Panama BK, Darie CC. Identification of dysregulation of atrial proteins in rats with chronic obstructive apnea using two-dimensional polyacrylamide gel electrophoresis and mass spectrometry. J Cell Mol Med. 2019 Apr;23(4):3016-3020. doi: 10.1111/jcmm.14131. Epub 2019 Feb 12. PMID: 30756508

90. Mihăşan M, Babii C, Aslebagh R, Channaveerappa D, Dupree E, Darie CC. Proteomics based analysis of the nicotine catabolism in Paenarthrobacter nicotinovorans pAO1. Sci Rep. 2018 Nov 2;8(1):16239. doi: 10.1038/s41598-018-34687-y. PMID: 30390017.

89. Aslebagh R, Channaveerappa D, Arcaro KF, Darie CC. Comparative two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) of human milk to identify dysregulated proteins in breast cancer. Electrophoresis. 2018 May 13. doi: 10.1002/elps.201800025. [Epub ahead of print] PMID: 29756217.

88. Wormwood KL, Ngounou Wetie AG, Gomez MV, Ju Y, Kowalski P, Mihasan M, Darie CC.
Structural Characterization and Disulfide Assignment of Spider Peptide Phα1β by Mass Spectrometry. J Am Soc Mass Spectrom. 2018 May;29(5):827-841. doi: 10.1007/s13361-018-1904-3. Epub 2018 Apr 16. PMID: 29663255.

87. Aslebagh R, Channaveerappa D, Arcaro KF, Darie CC. Proteomics analysis of human breast milk to assess breast cancer risk. Electrophoresis. 2018 Feb;39(4):653-665. doi: 10.1002/elps.201700123. PMID: 29193311.

86. Aslebagh, R, Wormwood, K. L., Channaveerappa, D,, Dupree, E. J., Sokolowska, I., Ngounou Wetie, A.G., Patel, S., Mihasan, M., Woods, A.G. Darie, C. C. (2017). Proteomics of the Post-translational Modifications: the knowns and the unknowns. Molecular Life, Vol 1 No 1, 29-42, ( doi: 10.26600/MolLife.1.1.4.2017 ).

85. Scheja, S., Domanskyi, S., Gamella, M., Wormwood, K. L., Darie, C. C., Poghossian, A., Schöning, M. J., Melman, A. Privman, V. and Katz, E. (2017), Glucose-triggered Insulin Release from Fe3+-cross-linked Alginate Hydrogel: Experimental Study and Theoretical Modeling. Chemphyschem. 2017 Jun 20;18(12):1541-1551. doi: 10.1002/cphc.201700195. Epub 2017 May 2.

84. Honarvarfard, E., Gamella, M., Channaveerappa, D., Darie, C.C., Poghossian, A., Schöning, M., Katz, E. (2017), Electrochemically Stimulated Insulin Release from a Modified Graphene–functionalized Carbon Fiber Electrode. Electroanalysis, 29, 1543-1553, DOI: 10.1002/elan.201700095.

83. Channaveerappa, D., Jacob, L., Wormwood, K.L., Heintz, T. A., Nassar, D.., Goodroq, R.J., McLerie, M., Ballard, G., Decker, R., Darie, C. C., Panama, B. K. (2017) Atrial electrophysiological and molecular remodelling induced by obstructive sleep apnea. J Cell Mol Med. 2017 Sep;21(9):2223-2235. doi: 10.1111/jcmm.13145. Epub 2017 Apr 12.

82. Patel, S.J., Darie, C.C, Clarkson, B.D. (2016). Effect of purified fractions from cell culture supernate of high-density pre-B acute lymphoblastic leukemia cells (ALL3) on the growth of ALL3 cells at low density. Electrophoresis. 2016 Nov 2. doi: 10.1002/elps.201600399. 

81. Patel, S.J., Darie, C.C, Clarkson, B.D. (2016). Exosome mediated growth effect on the non-growing pre-B acute lymphoblastic leukemia cells at low cell starting cell density. Am J Transl Res. 2016 Sep 15;8(9):3614-3629.

80. Patel, S.J., Trivedia, G.L., Darie, C.C, Clarkson, B.D. (2016). The Possible Roles of B-Cell Novel Protein-1 (BCNP1) in Cellular Signaling Pathways and in Cancer. J Cell Mol Med. 2016 Sep 29. doi: 10.1111/jcmm.12989. 

79. Aslebagh, R., Pfeffer, B.A., Fliesler, S.J., Darie, C.C. (2016). Mass spectrometry-based proteomics of oxidative stress:  Identification of 4-hydroxy-2-nonenal (HNE) adducts of amino acids using lysozyme and bovine serum albumin as model proteins. Electrophoresis. 37(20):2615-2623.

78. Patel, S.J., Dao, S., Darie, C.C, Clarkson, B.D. (2016). Defective Quorum Sensing of Acute Lymphoblastic Leukemic Cells: Evidence of Collective Behavior of Leukemic Populations as Semi-Autonomous Aberrant Ecosystems. Am J Cancer Res; 6(6):1177-230.

77. Aslebagh, R., Estifaee, P., Mededovic Thagard, S., Darie, C.C. (2016). Applications of Mass Spectrometry in Forensic Science: A Brief Introduction, in Forensic Science: A Multidisciplinary Approach, E. Katz & J. Halamek (Editors), Wiley-VCH, Weinheim, Germany, 71-87. ISBN: 978-3-527-33894-8.

76. Ngounou Wetie, A.G., Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. (2014). Comparative two dimensional polyacrylamide gel electrophoresis (2D-PAGE) of the salivary proteome of children with autism spectrum disorder (ASD). J. Cell. Mol. Med Nov;19(11):2664-78. doi: 10.1111/jcmm.12658. Epub 2015 Aug 20

75. Gamella, M., Guz, N., Pingarrón, J.M., Aslebagh, R., Darie, C.C., Katz, E. (2015). A bioelectronic system for insulin release triggered by ketone body mimicking diabetic ketoacidosis in vitro.
Chem Commun (Camb). 2015 Apr 21;51(36):7618-21. doi: 10.1039/c5cc01498k

74. Kelley, M., Ngounou Wetie, A.G., Darie, C.C. (2014). Correlation between Bisphenol A exposure and adverse health effects. Modern Chemistry & Applications, 2015, 3:147, doi:10.4172/2329-6798.1000147.

73. Wormwood, K.L., Aslebagh, R., Channaveerappa, D., Dupree, E.J.*, Borland, M.M.*, Ryan, J.P, Darie, C.C., Woods, A.G. (2014). Salivary proteomics and biomarkers in neurology and psychiatry. Proteomics Clinical Applications: 2015 Jan 29. doi: 10.1002/prca.201400153 http://onlinelibrary.wiley.com/doi/10.1002/prca.201400153/abstract

72. Ngounou Wetie, A.G., Wormwood, K.L., Russell, S., Ryan, J.P., Darie, C.C., Woods, A.G. (2014). A pilot proteomic analysis of salivary biomarkers in autism spectrum disorder. Autism Research. 2015 Jan 27. doi: 10.1002/aur.1450, http://onlinelibrary.wiley.com/doi/10.1002/aur.1450/abstract

71. Robu, A., Lupu, L., Aslebagh, R., Zamfir, A.D., Darie, C.C. (2014). Advances in mass spectrometry for glycoscreening and sequencing in biomedical research. Mod. Chem. Appl., 2: 138. doi:10.4172/2329-6798.1000138.

70. Woods, A.G., Wormwood, K.L., Ngounou Wetie, A.G., Aslebagh, R., Crimmins, B.S., Holsen, T.M., Darie, C.C. (2014). Autism Spectrum Disorders: an omics perspective. Proteomics Clin Appl. 2014 Oct 14. doi: 10.1002/prca.201400116. [Epub ahead of print].

69. Hutanu D, Frishberg MD, Guo L, Darie CC (2014). Recent Applications of Polyethylene Glycols (PEGs) and PEG Derivatives. Mod Chem Appl., 2: 132. doi:10.4172/2329-6798.1000132.

68. Wormwood, K.L., Dupree, E.J.*, Darie, C.C., Woods, A.G. (2014). Environmental ,nfluences on Biochemistry in Autism Spectrum Disorder. Autism-Open Access 4: e123. doi:10.4172/2165-7890.1000e123.

67. Hutanu, D., Darie, C.C. (2014). Trends in Characterization of PEGylated Proteins by Mass Spectrometry. Mod Chem Appl., 2: 2: 128. doi:10.4172/2329-6798.1000128.

66. Roy, U., Woods, A.G., Sokolowska, I., and Darie, C.C. (2014). Structural investigation of HSP70-HSP90 and HSP90-TDF interactions. Mod. Chem. Appl., 2: 126, doi: 10.4172/2329-6798.1000126

65. Ngounou Wetie, A.G., Wormwood, K.L.*, Thome, J., Dudley, E., Tarines, R., Gerlach, M., Woods, A.G., Darie, C.C. (2014). Potentially Interactive Oxidative Stress and Cholesterol Dysregulation Protein Markers are Elevated in Autism Spectrum Disorder, Electrophoresis. 35(14):2046-54. doi: 10.1002/elps.201300370.

64. Andrei, V., Ngounou Wetie, A.G., Mihai, I., Darie, C.C., Vasilescu, A. (2014). Detection of biomedically relevant stilbenes from wines by mass spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 361-82.

63. Woods, A.G., Iosifescu, D.V., Darie, C.C. (2014). Biomarkers in Major Depressive Disorder: the role of mass spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 545-60.

62. Ngounou Wetie, A.G., Woods, A.G., Darie, C.C. (2014). Mass spectrometric analysis of Post-translational modifications (PTMs) and protein-protein interactions (PPIs). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 205-35.

61. Schneider, S.S., Aslebagh, R., Ngounou Wetie, A.G., Sturgeon, S.R., Darie, C.C., Arcaro, K.F. (2014). Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 399-408.

60. Sandu, C., Ngounou Wetie, A.G., Darie, C.C., Steller, H. (2014). Thiostrepton, a natural compound that triggers heat shock response and apoptosis in human cancer cells: a proteomics investigation. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 443-51.

59. Baral, R., Ngounou Wetie, A.G., Darie, C.C., Wallace, K. (2014). Mass Spectrometry for Proteomics-based Investigation using the Zebrafish vertebrate model system. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 331-40.

58. Branza-Nichita, N., Petrareanu, C., Lazar, C., Sokolowska, I., Darie, C.C. (2014). Using proteomics to unravel the mysterious steps of the HBV life-cycle. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 453-81.

57. Patel, S., Ngounou Wetie, A.G., Darie, C.C., Clarkson, B.D. Cancer Secretomes and their Place in Supplementing other Hallmarks of Cancer (2014). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 409-42.

56. Woods, A.G., Sokolowska, I., Deinhardt, K., Darie, C.C. (2014). Investigating a novel protein using mass spectrometry: the example of Tumor Differentiation Factor (TDF). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 509-23.

55. Ngounou Wetie, A.G., DeKroon, R.M., Mocanu, M., Ryan, J.P., Darie, C.C., Woods, A.G. (2014). Mass Spectrometry for the Study of Autism and Neurodevelopmental Disorders. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 525-44.

54. Roy, U., Woods, A.G., Sokolowska, I., Darie, C.C. (2014). Utility of Computational Structural Biology in Mass Spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 107-28.

53. Ngounou Wetie, A.G., Shipp, D.A., Darie, C.C. (2014). Bottlenecks in proteomics. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 581-93.

52. Woods, A.G., Sokolowska, I., Ngounou Wetie, A.G., Wormwood, K., Aslebagh, R., Patel, S. Darie, C.C. (2014). Mass Spectrometry for Proteomics-based Investigation. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 1-32.

51. Sokolowska, I., Ngounou Wetie, A.G., Wormwood, K.*, Thome, J., Darie, C.C., Woods, A.G. Biomarkers in psychiatry (2013). The potential of biomarkers in psychiatry: focus on proteomics. J. Neural Transm. 1-10. doi: 10.1007/s00702-013-1134-6.

50. Wormwood, K.L.*, Sokolowska, I., Ryan, J.P., Russell, S.*, Darie, C. C., Woods, A. G. (2013). The Potential for Proteomics in Understanding Neurodevelopmental Disorders. J. Proteomics Bioinform. S5. http://dx.doi.org/10.4172/jpb.S5-001.

49. Roy, U., Sokolowska, I., Woods, A.G., and Darie, C.C. (2013) Tumor Differentiation Factor (TDF) and its Receptor (TDF-R): Is TDF-R an Inducible Complex with Multiple Docking Sites? Mod Chem appl 1:108. doi: 10.4172/2329-6798.1000108.

48. Roy, U., Woods, A.G., Sokolowska, I., Darie, C.C. (2013). Structural Evaluation and Analyses of Tumor Differentiation Factor. Protein J., 32(7):512-8. doi: 10.1007/s10930-013-9510-5.

47. Beglinger, K.M.*, Wormwood, K.L.*, Mattingly, J.W.*, Larlee, C.R.*, Woods, B.**, Wawro, B.*, Darie, C.C. (2013) Mass Spectrometry in an Undergraduate Setting: Clarkson University. Mod Chem appl 1:112. doi: 10.4172/2329-6798.1000112.

46. Hutanu, D., Woods, A.G., Darie, C.C. (2013). Recent Applications of Mass Spectrometry in Paint Analysis. Mod Chem appl 1:109. doi:10.4172/2329-6798.1000109.

45. Beglinger, K.M.*, Zielewicz, L.*, Ngounou Wetie, A.G., Darie, C.C. (2013). Analysis of proteins bound to contact lenses. Mod Chem appl 1:4. http://dx.doi.org/10.4172/2329-6798.1000114

44. Wormwood, K.L.*, Ngounou Wetie, A.G., Beglinger, K.M.*, Mattingly, J.W.*, Larlee, C.R.*, Woods, A.G., Darie, C. C. (2013). Using mass spectrometry to investigate protein biomarkers. Analele Stiintifice ale Universitatii Al. I. Cuza Iasi, Sectiunea IIA, Genetica si Biologie Moleculara, 14:3.

43. Darie C.C. (2013). Post-Translational Modification (PTM) Proteomics: Challenges and Perspectives. Mod Chem appl 1:e114. doi: 10.4172/2329-6798.1000e114.

42. Woods, A. G., Wormwood, K.L.*, Ngounou Wetie, A.G., Ryan, J.P., Darie, C. C. (2013). Proteomics and cholesterol in autism 3:2.
http://dx.doi.org/10.4172/2165-7890.1000112

41. Petrareanu, C., Macovei, A., Sokolowska, I., Woods, A.G., Darie, C.C., Lucian, D., Branza-Nichita N (2013). Comparative Proteomics Reveals Novel Components at the Plasma Membrane of Differentiated HepaRG Cells and Different Distribution in Hepatocyte- and Biliary-Like Cells. PLoS ONE 8(8): e71859. doi:10.1371/journal.pone.0071859

40. Darie C.C. (2013). Investigation of Protein-Protein Interactions by Blue Native-PAGE & mass spectrometry. Mod Chem appl 1: e111. doi:10.4172/mca.1000e111.

39. Ngounou Wetie, A.G., Sokolowska, I., Wormwood, K.L.*, Beglinger, K.*, Michel, T.M., Thome, J., Darie, C.C., Woods, A.G. (2013). Mass spectrometry methods for the detection of psychiatric biomarkers. Journal of Molecular Psychiatry, 1:8; doi:10.1186/2049-9256-1-8

38. Woods, A. G., Ngounou Wetie, A.G., Sokolowska, I., Russell, S.*, Ryan, J.P., Michel, T.M., Thome, J., Darie, C. C. (2013). Mass spectrometry as a tool for studying autism spectrum disorder. Journal of Molecular Psychiatry, 1: 6; doi:10.1186/2049-9256-1-6.

37. Darie, C.C. (2013). Mass Spectrometry and its Applications in Life Sciences. Australian Journal of Chemistry, 66, 719-720; DOI: 10.1071/CH13284.

36. Ngounou Wetie, A.G., Sokolowska, I., J., Woods, A.G., Darie, C.C. (2013). Identification of post-translational modifications by mass spectrometry. Australian Journal of Chemistry, 66, 734-748; DOI: 10.1071/CH13144.

35. Sokolowska, I., Ngounou Wetie, A.G., Woods, A.G., Darie, C.C. (2013) Applications of mass spectrometry in proteomics. Australian Journal of Chemistry, 66, 721-733; DOI: 10.1071/CH13137.

34. Darie C.C. (2013). Mass Spectrometry and Proteomics: Principle, Workflow, Challenges and Perspectives. Mod Chem appl 1: e105. doi:10.4172/mca.1000e105.

33. Woods, A.G., Sokolowska, I., Deinhardt, K., Sandu, C., Darie, C.C. (2013). Identification of Tumor Differentiation Factor (TDF) in select CNS neurons. Brain structure and function, 70:2835-2848; doi: 10.1007/s00429-013-0571-1.

32. Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Roy, U., Deinhardt, K., Darie, C.C. (2013) Protein-protein interactions: Switch from classical methods to proteomics-based approaches. Cellular and Molecular Life Sciences. doi: 10.1007/s00018-013-1333-1.

31. Florian, P.F., Macovei. A., Lazar, L., Milac, A.L., Sokolowska, I., Darie, C.C., Evans, R.W., Roseanu, A., Branza-Nichita, N. (2013). Characterization of the anti-HBV activity of lactoferrin-derived peptides. Journal of Medical Virology. doi: 10.1002/jmv.23549.

30. Sokolowska, I., Ngounou Wetie, A.G., Roy, U., Woods, A.G., Darie, C.C. (2013) Mass spectrometry investigation of glycosylation on the NXS/T sites in recombinant glycoproteins. Biochimica et Biophysica Acta. doi: 10.1016/j.bbapap.2013.04.022.

29. Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Roy, U., Loo, J.A., Darie, C.C. Investigation of stable and transient protein-protein interactions: past, present and future. Proteomics. doi: 10.1002/pmic.201200328

28. Roy, U., Sokolowska, I., Woods, A.G., Darie, C.C. (2012). Structural investigation of tumor differentiation factor. Biotechnology and Applied Biochemistry. doi: 10.1002/bab.1046

27. Sokolowska, I., Woods, A.G., Gawinowicz, M.A., Roy, U., Darie, C.C. (2012). Characterization of tumor differentiation factor (TDF) and its receptor (TDF-R). Cellular and Molecular Life Sciences. 70 (16), 2835-2848 doi: 10.1007/s00018-012-1185-0

26. Ngounou, A. G., Sokolowska, I., Woods, A. G., Wormwood, K. L., Dao, S., Patel, S., Clarkson, B. D., Darie, C.C. (2012) Automated Mass Spectrometry-based functional assay for the routine analysis of the secretome. Journal of Laboratory Automation. 18(1):19-29. DOI: 10.1177/2211068212454738.

25. Sokolowska, I., Woods, A. G., Gawinowicz, M. A., Roy, U., Darie, C.C. (2012) Identification of a potential tumor differentiation factor (TDF) receptor from steroid-responsive and steroid-resistant prostate cancer cells. FEBS Journal, 279 (14): 2579-94, DOI: 10.1111/j.1742-658.2012.08641.

24. Sokolowska, I., Gawinowicz, M. A., Ngounou, A. G., Darie, C.C. (2012). Disulfide proteomics for identification of extracellular or secreted proteins. Electrophoresis. 33(16):2527-36. DOI: 10.1002/elps.201200182.

23. Sokolowska, I., Ngounou, A. G., Woods, A. G., Darie, C.C. (2012). Automatic determination of disulfide bridges in proteins. Journal of Laboratory Automation. 17(6):408-16. DOI: 10.1177/2211068212454737.

22. Sokolowska, I., Dorobantu, C., Woods, A.G., Macovei, A., Branza-Nichita N, Darie, C.C. (2012). Proteomic analysis of plasma membranes isolated from undifferentiated and differentiated HepaRG cells. Proteome Science, 10:47, DOI: 10.1186/1477-5956-10-47.

21. Woods, A.G., Sokolowska, I., Darie, C.C. (2012). Identification of consistent alkylation of cysteine-less peptides in a proteomics experiment. Biochemical and Biophysical Research Communications, 419 (2): 305-8.

20. Sokolowska, I., Woods, A.G., Gawinowicz, M.A., Roy, U., Darie, C.C. (2012). Identification of a potential tumor differentiation factor (TDF) receptor from steroid-responsive and steroid-resistant breast cancer cells. J. Biol. Chem., 287(3): 1719-33.

19. Woods A.G., Sokolowska I., Taurines R., Gerlach M., Dudley E., Thome J., Darie C.C. (2012) Potential biomarkers in psychiatry: focus on the cholesterol system. Journal of Cellular and Molecular Medicine. 16(6):1184-95. doi: 10.1111/j.1582-4934.2012.01543.

18. Thome J., Coogan A.N., Woods A.G., Darie C.C., Hler F. (2011). CLOCK Genes and Circadian Rhythmicity in Alzheimer Disease. J Aging Res., 2011: 383091 doi:10.4061/2011/383091.

17. Sokolowska, I., Woods, A.G., Wagner, J.*, Dorler, J.*, Wormwood, K.*, Thome, J., Darie, C.C. (2011). Mass spectrometry for proteomics-based investigation of oxidative stress and heat shock proteins. ACS Books, Oxidative Stress: Diagnostics and Therapy. Editors: E. Silvana Andreescu & Maria Hepel; 1083 (12), 341- 367

16. Woods, A.G., Sokolowska, I., Yakubu, R.*, Butkiewicz, M.*, LaFleur, M.*, Talbot, C.*, Darie, C.C. (2011). Blue Native PAGE and mass spectrometry as an approach for the investigation of stable and transient protein-protein interactions. ACS Books, Oxidative Stress: Diagnostics and Therapy. Editors: E. Silvana Andreescu & Maria Hepel; 1083 (13), 369-411.

15. Darie C.C., Deinhardt, K.I., Zhang G., Cardasis H.L., Chao., Neubert T.A. (2011). Identifying transient protein-protein interactions in EphB2 signaling by Blue Native PAGE and mass spectrometry. Proteomics; 11(23): 4514-28.

14. Darie C.C., Litscher E. S., Wassarman P. M. (2008). Structure, processing, and polymerization of rainbow trout egg vitelline envelope proteins. Applications of Mass Spectrometry in Life Safety. NATO Science for Peace and Security Series. Springer-Verlag, Düsseldorf, Germany, pp 23-36

13. Darie C.C., Shetty V., Spellman D.S., Zhang G., Xu C., Cardasis H.L., Blais S., Fenyo D., Neubert T.A. (2008). Blue Native PAGE and mass spectrometry analysis of the ephrin stimulation- dependent protein-protein interactions in NG108-EphB2 cells. Applications of Mass Spectrometry in Life Safety. NATO Science for Peace and Security Series. Springer-Verlag, Düsseldorf, Germany, pp 3-22

12. Spellman D.S., Deinhardt K, Darie, C.C., Chao, M.V., Neubert, T.A. (2008). Stable Isotopic Labeling of Amino Acids in cultured primary neurons: application to BDNF-dependent phosphotyrosine-associated signaling.signal. Mol. Cell. Proteomics. 7 (6):1067-1076

11. Darie C.C., Janssen W.G., Litscher E.S., Wassarman P.M. (2008). Purified trout egg vitelline envelope proteins VEðb and VEðg polymerize into homomeric fibrils from dimers in vitro. Biochim. Biophys. Acta - Proteins and Proteomics; 1784 (2):385-392

10. Litscher E.S., Janssen W.G., Darie C.C., Wassarman P.M. (2008). Purified mouse egg zona pellucida glycoproteins polymerize into homomeric fibrils under non-denaturing conditions. J. Cel. Physiol.; 214 (1): 153-157

9. Darie C.C., De Pascalis L., Mutschler B., Haehnel W. (2006). Studies of the Ndh complex and photosystem II from mesophyll and bundle sheath chloroplasts of the C4-type plant Zea mays. J. Plant Physiol.; 163 (8): 800-808

8. Darie C.C., Biniossek M.L., Gawinowicz M.A., Milgrom Y, Thumfart J.O., Jovine L., Litscher E.S., Wassarman P.M. (2005). Mass spectrometric evidence that proteolytic processing of rainbow trout egg vitelline envelope proteins takes place on the egg. J. Biol. Chem. 280 (45): 37585-37598

7. Darie C.C., Biniossek M.L., Winter, V, Mutschler B., Haehnel W. (2005). Isolation and structural characterization of the Ndh complex from mesophyll and bundle sheath chloroplasts of Zea mays. FEBS Journal 272: 2705-2712

6. Jovine L., Darie C.C., Litscher E.S., Wassarman P.M. (2005). ZP domain proteins and glycoproteins. Annu. Rev. Biochem. 74: 83-114

5. Wassarman P.M., Jovine L., Qi H., Williams Z., Darie C., Litscher E. (2005). Recent aspects of mammalian fertilization research. Mol. Cell. Endocrinol. 234 (1-2): 95-103

4. Darie C.C., Biniossek M.L., Jovine L., Litscher E.S., Wassarman P.M. (2004). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Biochemistry 43: 7459-7478

3. Darie C., Drepper F., Mutschler B., Mauch S., Hoerth P., Biniossek M., Haehnel W. (2001). Studies of cyclic electron transport in bundle sheath chloroplasts and isolation of the NDH complex from chloroplasts of Zea mays. Proceedings of the 13th Congress of Photosynthesis, S14-002

2. Artenie V., Godja A., Naum E., Darie C. (1999). Glutathione-peroxidase activity from sanguine serum in patients with different mental diseases. J. Med. Biochem. (J. Cell. Mol. Med.) 3: 73-78

1. Darie C., Jerca L., Artenie V., Margina A. (1998). Glutathione peroxidase, an oxidative stress biomarker, in the menstrual cycle. Rev. Med. Chir. Soc. Med. Nat. 102: 138-144

ORAL PRESENTATIONS

106. Darie C.C. & Channaveerappa, D. Proteomics in Rats with Obstructive Sleep Apnea and matched controls, Eastern Analytical Symposium (international conference), November 2018, Princeton, NJ.

105. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J,. Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). Eastern Analytical Symposium and Exhibition (international conference). November, 2018. Princeton, NJ.

104. Darie, C.C. Introduction to mass spectrometry and proteomics. 2nd International School “PROTEOMICS – from Introduction to Clinical Applications”, University Alexandru Ioan Cuza (international conference), July 2018, Iasi, Romania.

103. Darie, C.C., Channaveerappa, D.  Proteomics in Obstructive Sleep Apnea. 2nd International School “PROTEOMICS – from Introduction to Clinical Applications”, University Alexandru Ioan Cuza (international conference), July 2018, Iasi, Romania.

102. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond,  Darie, C.C.  Proteomic analysis of lake trout (Salvelinus namaycush). 2nd International School “PROTEOMICS – from Introduction to Clinical Applications”, University Alexandru Ioan Cuza (international conference), July 2018, Iasi, Romania.

101. Darie, C.C. Applications of Mass Spectrometry in Biomarker Discovery and Protein Characterization, Department of Biochemistry, University of Medicine & Pharmacy, June 18, 2018, Iasi, Romania.

100. Darie, C.C. Applications of Mass Spectrometry in Protein Characterization, Petru Poni Institute of Macromolecular Chemistry of Chemistry, Romanian Academy, June 19, 2018, Iasi, Romania.

3. Darie, C.C. Applications of Mass Spectrometry in Protein Characterization, Ion Ionescu de la Brad University of Veterinary Medicine, June 20, 2018, Iasi, Romania.

99. Darie, C.C. Applications of Mass Spectrometry in Biomarker Discovery and Protein Characterization, Department of Biology, Al. I. Cuza University, June 21, 2018, Iasi, Romania.

98. Darie, C.C. Applications of Mass Spectrometry in Pharmaceutical and Biotechnology Industry. The 2018 31st CAMP meeting, May 18-20, 2018, Canandaigua, NY.  

97. Dupree, E.J., My Experiences and Research at Clarkson University. Department of Chemistry and Biomolecular Science Freshman Seminar, Clarkson University, March 14 2018, Potsdam, NY.

96. Darie, C.C., Applications of Mass Spectrometry in Biomedical Research. Department of Chemistry and Biomolecular Science Freshman Seminar, Clarkson University, February 14, 2018, Potsdam, NY.

95. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond,  Darie, C.C.  Effect of Legacy Chemicals on the Great Lakes Ecosystem: A Proteomic approach. Department Seminar, Chemistry and Biomolecular Science, Clarkson University, February 2018, Potsdam, NY.

94. Channaveerappa, D., Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C.  Identification of a protein signature for Obstructive Sleep Apnea (OSA), Clarkson University Department Presentation, December 2017, Potsdam, NY.

93. Darie, C.C., Applications of mass spectrometry in biomedical research, International Conference of the Romanian Society for Biochemistry & Molecular Biology (international conference), 8 – 9 June 2017, Timișoara, Romania.

92. Mihasan, M., Arthrobacter nicotinovorans pAO1- Why do we need its proteome? State Unversity of New York Potsdam, Department of Biology, Host Dr. Robert Ewy, May 3 2017, Potsdam, NY.

91. Mihasan, M., Arthrobacter nicotinovorans pAO1 as a tool to produce neuroactive compounds, Biology Dept., St Lawrence University, Host Dr. Babasola Fateye, April 18, 2017, Canton, NY

90. Mihasan, M., Arthrobacter nicotinovorans pAO1 - a tool for sustainable production of value-added chemicals, Biology, Clarkson University, Department of Biology, Host Dr. Kenneth Wallace, April 21, 2017, Potsdam, NY.

89. Mihasan, M., Arthrobacter nicotinovorans pAO1 as a tool to produce neuroactive compounds, Biology Dept., St Lawrence University, Host Dr. Babasola Fateye, April 18, 2017, Canton, NY 88. Mihasan, M., Arthrobacter nicotinovorans pAO1 - Why do we need its proteome? Clarkson University, School of Arts & Sciences, Walsh Seminar Series, Host Dr. Costel C. Darie, April 2017, Potsdam, NY.

87. Darie, C.C., Mass spectrometry and its applications in protein analysis, State Unversity of New York, Department of Chemistry, Host Dr. Fadi Bou-Abdallah, April 2017, Potsdam, NY.

86. Mihasan, M., Arthrobacter nicotinovorans pAO1 - Why do we need its proteome? State Unversity of New York, Department of Chemistry, Host Dr. Fadi Bou-Abdallah, April 2017, Potsdam, NY.

85. Mihasan, M., Arthrobacter nicotinovorans pAO1 - Why do we need its proteome? Clarkson University, Department of Chemistry & Biomolecular Sciences, Host Dr. Costel C. Darie, March 2017, Potsdam, NY.

84. Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry, Host Dr. M. Wriedt, February 2017, Potsdam, NY.

83. Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize Human Jumping Translocation Breakpoint (hJTB) Protein, Eastern Analytical Symposium and Exposition (international conference) November 13-16, 2016, Somerset, NJ.

82. Darie, C.C. & Aslebagh, R. Building a Protein Biomarker Signature for Early Detection of Breast Cancer Using Discovery Proteomics, Eastern Analytical Symposium and Exposition (international conference), November 13-16, 2016, Somerset, NJ.

81. Wormwood, K.L. Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Protein Biomarker Discovery in Autism Spectrum Disorder (ASD), Eastern Analytical Symposium and Exposition, (international conference). November 13-16, 2016. Somerset, NJ.

80. Darie, C.C. Mass Spectrometry-Based Proteomics of Oxidative Stress: Identification of 4-hydroxy-2-nonenal (HNE) Adducts of Amino Acids Using Lysozyme and Bovine Serum Albumin as Model Proteins,  Eastern Analytical Symposium and Exposition (international conference), November 13-16, 2016, Somerset, NJ.

79. Darie, C.C. Applications of Mass Spectrometry in Biomedicine. Department of Biology, Al. I. Cuza University, November 11, 2016, Iasi, Romania.

78. Darie, C.C. Mass spectrometry-based proteomics for biomarker discovery: focus on Breast Cancer and Autism Spectrum Disorder. National Institute of Research for Electrochemistry and Condensed Matter, November 8, 2016, Timisoara, Romania.

77. Darie, C.C. Mass spectrometry-based proteomics for biomarker discovery in Autism Spectrum Disorder. Department of Chemistry, State University of New York at Buffalo. September 16, 2016, Buffalo, NY.  

76. Darie, C.C. & Channaveerappa D. Applications of Mass Spectrometry in Biomedical Research. The 2016 CAMP meeting, May 18-20, 2016, Canandaigua, NY. 

75. Borland, M. & Darie, C.C., Proteomics-Based Biomarker Discovery for Autism Spectrum Disorder” 18th Annual Spring Symposium on Undergraduate Research Experiences.  April 16, 2016.  Clarkson University, Potsdam, NY.

74. Brisbin, A. & Darie, C.C., Identification of Proteins in the Annulus Fibrosus and Nucleus Pulposus of the Mature Bovine Intervertebral Disc, 18th Annual Spring Symposium on Undergraduate Research Experiences.  April 16, 2016.  Clarkson University, Potsdam, NY.

73. Wormwood, K.L.& Darie, C.C., MS based Protein Biomarkers” Chromatography Forum of Delaware Valley’s Spring Symposium.  April 14, 2016.  Wilmington, DE.

72. Patel, S., Darie, C.C., Clarkson, B.D. Collective Behavior in Acute Lymphoblastic Leukemia. Department of Chemistry & Biomolecular Science, Clarkson University, April 8, 2016, Potsdam, NY.

71. Channaveerappa D. & Darie C.C., Functional Investigation of Human Jumping Translocation Breakpoint (hJTB) Protein by Mass Spectrometry-based Proteomics. Department of Chemistry & Biomolecular Science, Clarkson University, March 11, 2016, Potsdam, NY.

70. Wormwood, K.L.& Darie, C.C.,, My Journey at Clarkson University Clarkson University , Clarkson University, Department of Chemistry, Host Dr. E. Katz, February 2016, Potsdam, NY.

69. Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry, Host Dr. E. Katz, February 2016, Potsdam, NY.

68. Patel, S., Darie, C.C., Clarkson, B.D. Identification of Differentially Secreted Proteins Involved in Defective Quorum Sensing in Ph+ Acute Lymphoblastic Leukemia (ALL) using SILAC. Department of Chemistry & Biomolecular Science, Clarkson University, November 2015, Potsdam, NY.

67. Darie, C.C., Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Eastern Analytical Symposium and Exposition (national conference), November 2015, Somerset, NJ.

66. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015). Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. 2015 Eastern Analytical Symposium (national conference), November 16-18, 2015, Somerset, NJ.

65. Channaveerappa D., Aslebagh R., Arcaro F. K., Darie C. C., Proteomics Study to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls Using Mass Spectrometry, 2015 Eastern Analytical Symposium and Exposition (EAS), November 2015, Somerset, NJ.

64. Darie, C.C. (invited). Use of Mass Spectrometry for Protein Characterization and Biomarker Discovery, Department of Chemistry & Biochemistry, Old Dominion University, November, 2015, Norfolk, VA.

63. Aslebagh R., Fliesler S. J., Pfeffer B. A., Darie C. C., Mass spectrometric identification of amino acids modified by 4-hydroxy-2-nonenal (HNE) as a model for proteome-scale analysis of oxidative stress, 2015 American Chemical Society Northeastern Regional (ACS NERM) Meeting, June 2015, Ithaca, NY.

62. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015). Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. 2015 American Chemical Society Northeastern Regional (ACS NERM) Meeting, June 2015, Ithaca, NY.

61. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Proteomics Study to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls Using Mass Spectrometry. 2015 American Chemical Society Northeastern Regional (ACS NERM) Meeting, June 2015, Ithaca, NY.

60. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, k.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk. 33nd Annual Chemistry Graduate Student Symposium, University at Buffalo, the State University of New York, May 2015, Buffalo, NY.

59. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015).  Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. Department Seminar (local conference), April 2015, Potsdam, NY.

58. Ngounou Wetie, A.G., Novel applications of mass spectrometry-based proteomics for biomarker discovery of autism spectrum disorder (ASD) and investigation of protein post-translational modifications (PTMs). Ph.D. thesis defense, Department of Chemistry and Biomolecular Science, April 2015, Potsdam, NY.

57. Invited: Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry, Host Dr. E. Katz, March 2015, Potsdam, NY.

56. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, k.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk. Seminar at the Department of Chemistry and Biomolecular Science (local presentation), February 2015, Clarkson University, Potsdam, NY.

55. Ngounou Wetie, A.G., The quest for a biomarker of autism spectrum disorder (ASD). Department of Chemistry and Biomolecular Science (local presentation), January 2015, Potsdam, NY.

54. Darie, C.C. Use of Mass Spectrometry for Protein Characterization and Biomarker Discovery, Department of Physics, Clarkson University Colloquium, December, 2014, Potsdam, NY.

53. Darie, C.C. Use of Mass Spectrometry for Protein Characterization and Biomarker Discovery. Department of Chemistry, SUNY Potsdam, November 2014, Potsdam, NY.

52. Invited: Darie, C.C., Mass spectrometry for protein analysis, Trudeau Institute, January 2014, Saranac Lake, NY.

51. Invited: Woods, A.G., Darie, C.C. Protein Biomarkers in Autism Spectrum Disorders, The International Center for Autism Research and Education (ICare4Autism) Conference "Autism: Cutting Edge Research and Promising Treatment Approaches" (international meeting), Hotel Pennsylvania, June 2014, New York, NY.

50. Ngounou Wetie, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Chemistry Graduate Student Symposium at the University at Buffalo, May 2014, Buffalo, NY.

49. Invited: Darie, C.C., Mass spectrometry for protein characterization and biomarker discovery. University of Connecticut, Department of Chemistry, Host Dr. J. Rusling, April 2014, Storrs, CT.

48. Invited: Ngounou Wetie, A.G., Darie, C.C. Investigation of the mechanism of action of the Tumor Differentiation Factor, Department of Chemistry Seminar, SUNY Plattsburgh, March 2014, Plattsburgh, NY.

47. Invited: Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry, Host Dr. E. Katz, March 2014, Potsdam, NY.

46. Ngounou Wetie, A.G., Darie, C.C. Functional investigation of the tumour differentiation factor (TDF) protein. Clarkson University, Department of Chemistry, September 2013, Potsdam, NY.

45. Invited: Woods, A.G., Darie, C.C. Protein Biomarkers in Autism Spectrum Disorders, The International Center for Autism Research and Education (ICare4Autism) Conference "Autism: Cutting Edge Research and Promising Treatment Approaches" (international meeting), Albert Einstein College of Medicine in conjunction with Montefiore Medical Center, June 2014, New York, NY.

44. Sokolowska, I., Darie, C.C. Investigation of Tumor Differentiation Factor (TDF) and its putative receptor (TDF-R), Clarkson University, Department of Chemistry, Thesis defense, May 2013, Potsdam, NY.

43. Invited: Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University Chemistry, Department of Chemistry, Host Dr. S. Minko, March 2013, Potsdam, NY.

42. Sokolowska, I. & Darie, C.C. Identification of Tumor Differentiation Factor Receptor, Department of Chemistry Seminar Series, Clarkson University, January 2013, Potsdam, NY.

41. Invited: Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University Chemistry, Department of Chemistry, Host Dr. E. Katz, April 2012, Potsdam, NY.

40. Invited: Darie, C.C., Tumor Differentiation Factor as a theragnostic agent for breast & prostate cancer, Department of Chemistry, SUNY Plattsburgh, February 2012, Plattsburgh, NY.

39. Invited: Darie, C.C., Tumor Differentiation Factor and its potential biomedical applications, Sloan Kettering Institute, Molecular Pharmacology & Chemistry Program, November 2011, New York, NY.

38. Sokolowska, I. & Darie, C.C. Identification of Tumor Differentiation Factor Receptor, Department of Chemistry Seminar Series, Clarkson University, September 2011, Potsdam, NY.

37. Yakubu, R.*, Sokolowska, I., Mathur, S., Darie, C.C. Biomarker Discovery through the use of Proteomics Tools, 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

36. Butkiewicz, M.*, Woods, A. G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder", (April 2011). 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

35. Sokolowska, I., Darie, C.C., Investigation of Tumor Differentiation Factor and its receptor - potential serum biomarker and therapeutic target in breast and prostate cancer, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

34. Invited: Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University Chemistry, Department of Chemistry, Host Dr. E. Katz, April 2011, Potsdam, NY.

33. Yakubu, R.*, Sokolowska, I., Mathur, S., Darie, C.C., Biomarker Discovery through the use of Proteomics Tools, Honors Program, Clarkson University, April 2011, Potsdam, NY.

32. Invited: Darie, C.C., Mass spectrometry & proteomics, Host Dr. E.S. Andreescu, Clarkson University, Department of Chemistry, March 2011, Potsdam, NY.

31. Invited: Darie, C.C, Serum biomarkers in Neuroscience, Host Dr. A.G. Woods, Clarkson University, Neurobiology, Department of Biology, March 2011, Potsdam, NY.

30. Invited: Costel Darie, Supriya Mathur, Izabela Sokolowska, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Alisa Woods. Analysis of transient protein-protein interactions within EphB2-dependent signaling. 37th North East Regional Meeting of the American Chemical Society, Symposium "Oxidative stress: diagnosis and therapy", June 2-5, 2010, Potsdam, NY

29. Invited: Costel Darie, Izabela Sokolowska, Supriya Mathur, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Mary Ann Gawinowicz, Alisa Woods. New proteomics approaches for identification, quantitation and validation of new serum biomarkers. 37th North East Regional Meeting of the American Chemical Society, Symposium "Detection of Protein Biomarkers for Medical Applications", June 2-5, 2010, Potsdam, NY

28. Izabela Sokolowska, Supriya Mathur, Costel Darie. New proteomics approaches for identification of new serum biomarkers. 37th North East Regional Meeting of the American Chemical Society, Symposium "Detection of Protein Biomarkers for Medical Applications", June 2-5, 2010, Potsdam, NY

27. Melissa Butkiewicz* & Costel Darie. Identification of serum biomarkers in autism spectrum disorders. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY

26. Invited: Costel Darie, Izabela Sokolowska, Supriya Mathur, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Mary Ann Gawinowicz, Alisa Woods. New proteomics approaches for identification, quantitation and validation of new serum biomarkers. 37th North East Regional Meeting of the American Chemical Society, Symposium "Detection of Protein Biomarkers for Medical Applications", August 10-12, 2010, National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA

25. Invited: Costel Darie, Supriya Mathur, Izabela Sokolowska, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Alisa Woods. New proteomics approaches for identification of new serum biomarkers. Diaspora, Workshop 8: Trends in Biomedical Genomics & Proteomics, September 22-24, 2010, Bucharest, Romania

24. Invited: Costel Darie, Supriya Mathur, Izabela Sokolowska, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Alisa Woods. Investigation of molecular mechanisms of Tumor Differentiation Factor-induced cell differentiation. Diaspora, Workshop 20: Energing challenges in agriculture and food - the management approach, September 22-24, 2010, Bucharest, Romania

23. Invited: Costel Darie, Supriya Mathur, Izabela Sokolowska, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Alisa Woods. Analysis of transient protein-protein interactions within EphB2-dependent signaling. Annual International Conference of the RSBMB, Romanian Journal of Biochemistry, 47, Suppl., 25 (2010), September 23-25, 2010, Bucharest, Romania

22. Darie C.C., Platica M. (2009). Tumor Differentiation Factor as a potential differentiation agent in breast and prostate cancer. Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, USA

21. Darie C.C., Platica M. (2009). Tumor Differentiation Factor as a potential differentiation agent in breast and prostate cancer. Department of Hematology/Oncology, Mount Sinai Medical Center (Martell Foundation), New York, NY, USA.

20. Darie C.C., Neubert, T.A. (2008). Analysis of stable and transient protein-protein interactions by Blue Native PAGE and mass spectrometry. Skirball Institute, New York University, New York, NY, USA

19. Darie C.C., Neubert, T.A. (2007). Analysis of the EphB2 signal transduction pathway upon ephrinB1-Fc stimulation. 1st International Conference on Applications of Mass Spectrometry in Life Safety (NATO sponsored event), Herculane, Romania

18. Darie C.C., Neubert, T.A. (2007). Analysis of stable and transient protein-protein interactions by Blue Native PAGE and mass spectrometry. Skirball Institute, New York University, New York, NY, USA

17. Darie C.C., Wassarman P. M. (2004). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Regeneron Pharmaceuticals, Tarrytown, NY, USA

16. Darie C.C., Wassarman P. M. (2006).Investigation of the assembly and disassembly of the fish egg vitelline envelope proteins. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, NY, USA

15. Darie C.C., Wassarman P. M. (2005). Purification and analysis of fish egg vitelline envelope proteins. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, NY, USA

14. Darie C.C., Wassarman P. M. (2004). Disulfide assignment in fish egg vitelline envelope proteins by mass spectrometry. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, NY, USA

13. Darie C.C., Wassarman P. M. (2003). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, NY, USA

12. Darie C.C., Wassarman P. M. (2003). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, NY, USA

11. Darie C., Sujak A., Haehnel W. (2002). Four dimensional isolation of the Ndh complex from maize thylakoids, Cambridge University, Cambridge, UK

10. Darie C.., Mutschler B., Biniossek M., Winter V., Haehnel W. (2002). Studies of the NAD(P)H: Plastoquinone oxidoreductase (Ndh Complex) from maize chloroplasts, The Annual German Botanical Congress, Freiburg, Germany

9. Darie C. Haehnel W. (2001). Recombinant DNA technology, language and brain; language affinity, neuronal and genetic bases, Feldberg, BW, Germany 8. Darie C., Mutschler B., Haehnel W. (2001). Studies of the NAD(P)H: Plastoquinone oxidoreductase, Transient protein-protein complexes, Aarchus, Denmark

7. Darie C. , Drepper F., Mutschler B., Haehnel W. (2001). Isolation and functional characterization of the plastidial NAD(P)H-dehydrogenase from Zea mays, SFB 388, Zellulaere Funktionen Dynamischer Proteinwechselwirkungen, Freiburg, Germany

6. Darie C. Haehnel W. (2001). Chlororespiration and poising of cyclic electron transport; Plastoquinone as electron transporter between thylakoid NADH-Dehydrogenase and peroxidase, Graduiertenkolleg "Biochemistry of enzymes," Feldberg, BW, Germany

5. Darie C. Haehnel W. (2001).Two dimensional gel electrophoresis and mass spectrometry for proteome analysis, Department of Biochemistry, University of Freiburg, Germany

4. Darie C. Haehnel W. (2001). Isolation of the Ndh complex from chloroplasts from Zea mays, 18th Photosynthesis congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Faculty of Biology, University Konstanz, Germany

3. Darie C., Haehnel W. (2000). Plastidial NAD(P)H-dehydrogenase, Graduiertenkolleg "Biochemistry of enzymes,"Institute of Physical Chemistry, University of Freiburg, Germany

2. Darie C., Haehel W. (2000). Plastidial Ndh complex, 17th Photosynthesis Congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Institute for Physical Chemistry, Freiburg, Germany

1. Darie C. (1999). Isolation, cloning and expression as fusion proteins of the ndh genes of the Ndh complex (NAD(P)H:plastoquinone-oxidoreductase) from mesophyll cloroplasts from Zea mays, Department of Biology, Al.I. Cuza University, Iasi, Romania

(* represents undergraduate students)

ABSTRACTS AND POSTER PRESENTATIONS

(* represents undergraduate students, ** represents high school students)

162. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 57th Eastern Analytical Symposium and Exposition (international conference), November 2018, Princeton, NJ.

161. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Meiman, J., Darie, C.C.  Effects of legacy chemical exposure in the Great lakes ecosystem on the human proteome. Eastern Analytical Symposium and Exhibition (international conference)Graduate Student Award Poster. November, 2018, Princeton, NJ.

160. Channaveerappa, D., Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Mass Spectrometry based Proteomics to Investigate the Molecular Changes in Rat Atria during Obstructive Sleep Apnea, Eastern Analytical Symposium and Exhibition (international conference). November, 2018, Princeton, NJ.

159. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 1st North American Mass Spectrometry Summer School, University of Wisconsin (international conference), August, 2018, Madison, WI.

158. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B., Darie, C.C.  
Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. 1st Annual North American Mass Spectrometry Summer School, University of Wisconsin (international conference), August, 2018. Madison, WI.

157. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J,. Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). 1st Annual North American Mass Spectrometry Summer School, University of Wisconsin (international conference), August, 2018. Madison, WI.

156. Channaveerappa, D., Lux, J.C., McLerie, M., Panama, B.K., Darie C.C. Mass Spectrometry based Proteomics to Investigate the Molecular Changes in Rat Atria during Obstructive Sleep Apnea, 1st Annual North American Mass Spectrometry Summer School, University of Wisconsin (international conference), August, 2018. Madison, WI.

155. Channaveerappa, D., Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry, 32nd Annual Symposium of The Protein Society (international Conference), July 2018, Boston, MA.

154. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B., Darie, C.C.  
Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. 32nd Annual Symposium of The Protein Society (international Conference), July 2018, Boston, MA.

153. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B., Darie, C.C.  
Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. Research and Project Showcase (RAPS), Clarkson University (local presentation), July, 2018, Potsdam, NY.

152. Mihasan, M., Babii, C., Aslebagh,  R., Channaveerappa D., Dupree, E., Darie C.C., Proteomic analysis of nicotine response in Paenarthrobacter nicotinovorans pAO1, The 43rd FEBS Congress, Biochemistry Forever, (international conference),  July 7 - 12, 2018, Prague, Czech Republic.

151. Wormwood, K.L., Dupree, E.J., Woods, A.G., Abbeduto, L., Darie, C.C. Mass Spectrometry-based Salivary Proteomics Investigation of Fragile X Syndrome (FXS), 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 2-7, 2018. San Diego, CA.

150. Dupree, E.J., Crimmins, B., Holsen, T., Pagano, J., Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 2-7, 2018. San Diego, CA.

149. Aslebagh, R., Channaveerappa D., Arcaro K.F., Darie C.C., Mass Spectrometry-based Proteomics of Human Breast Milk by Two-Dimensional Polyacrylamide Gel Electrophoresis (2D-PAGE) to Assess Breast Cancer Risk. 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 2-7, 2018. San Diego, CA.

148. Channaveerappa, D., Mihasan, M., Babii, C., Aslebagh, R., Dupree, E.J., Darie C.C. Proteomics based analysis of the nicotine catabolism in Paenarthrobacter nicotinovorans pAO1. 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 2-7, 2018. San Diego, CA.

147. Jayathirtha, M., Channaveerappa, D.,Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry, 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 2-7, 2018. San Diego, CA.

146. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J,. Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). 31st Annual CAMP Conference (regional conference),May, 2018. Canandaigua, NY.

145. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 31st Annual CAMP Conference (regional conference), May, 2018. Canandaigua, NY.

144. van Doorn, W.P.T.M., Kadambar, V.K., Meex, S.J.R., Melman, A., Darie, C.C. Reduction and binding of 2-nitroimidazoles to proteins: an in vitro study using lysozyme and albumin, 31st Annual CAMP Conference (regional conference),May, 2018. Canandaigua, NY.

143. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B.K., Darie, C.C.  Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. 31st Annual CAMP Conference (regional conference), May, 2018. Canandaigua, NY.

142. Jayathirtha, M., Channaveerappa, D.,Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry. 36th Annual Graduate Student Symposium, Department of Chemistry, State University of New York at Buffalo (regional conference), May 2018, Buffalo, New York.

141. van Doorn, W.P.T.M., Kadambar, V.K., Meex, S.J.R., Melman, A., Darie, C.C. Reduction and binding of 2-nitroimidazoles to proteins: an in vitro study using lysozyme and albumin,  36th Annual Graduate Student Symposium, Department of Chemistry, State University of New York at Buffalo (regional conference), May 2018, Buffalo, New York.

140. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B.K., Darie, C.C. Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea, 36th Annual Graduate Student Symposium, Department of Chemistry, State University of New York at Buffalo (regional conference), May 2018, Buffalo, New York.

139. Jayathirtha, M., Channaveerappa, D.,Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry, 9th Annual American Chemical Society Research Symposium (local conference), Mar, 2018, SUNY Potsdam, NY.

138. Aslebagh, R., Channaveerappa D., Arcaro  K.F., Darie C.C. Mass Spectrometry-based Proteomics of Human Breast Milk to Identify Potential Breast Cancer Biomarkers. Twelfth International Symposium on Mass Spectrometry in the Health & Life Sciences: Molecular & Cellular Proteomics (international conference). August 20-24, 2017, San Francisco, CA.

137. Jacob, L., Channaveerappa, D.,  Wormwood, K.L., Meredith, M., Brian, P. K.,Costel C. C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry. Clarkson University Summer SURE conference (local conference), July 2017, Potsdam, NY.

136.Aslebagh, R., Channaveerappa D., Dupree, E.J., Wormwood, K.L., Woods, A.G., Darie C.C. Use of mass spectrometry for protein characterization and biomarker discovery. 5th European Chemical Biology Symposium (international conference). 2-4 July , 2017, Budapest, Hungary.

135. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M,. Darie, C.C.  Assessment of the effects of pollutants in the Great Lakes on the human proteome. 31st The Protein Society Annual Conference (international conference). July 24-27, 2017, Montreal, Canada.

134. Mihasan, M., Babii, C., Aslebagh, R., Darie C.C. Nicotine-Induced Proteome of Arthrobacter nicotinovorans, 31st The Protein Society Annual Conference (international conference). July 24-27, 2017, Montreal, Canada.

133. Channaveerappa, D., Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C. Mass Spectrometry based Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria. 31st The Protein Society Annual Conference (international conference). July 24-27, 2017, Montreal, Canada.

Mihasan, M., Babii, C., Aslebagh, R., Darie C.C. Nicotine-Induced Proteome of Arthrobacter nicotinovorans, 65th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics (international conference). June 4-8, 2017, Indianapolis, IN

132. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Structural Characterization of Spider Peptide Phα1β using Mass Spectrometry Based Approaches, 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 4-8, 2017. Indianapolis, IN.

131. Dupree, E.J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond M., Darie, C.C.  Assessment of the effects of pollutants in the Great Lakes on the human proteome. 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 4-8, 2017. Indianapolis, IN.

130. Aslebagh, R., Channaveerappa D., Arcaro K.F., Darie C.C., Mass Spectrometry- based Proteomics of Human Breast Milk for Breast Cancer Biomarker Discovery. 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 4-8, 2017. Indianapolis, IN.

129. Channaveerappa, D., Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C. Mass Spectrometry based Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria. 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics (international conference). June 4-8, 2017. Indianapolis, IN.

128. Mihasan, M., Babii, C., Aslebagh, R., Darie C.C. Nicotine-Induced Proteome of Arthrobacter nicotinovorans, Experimental Biology Conference 2017 (international conference). April  22-26, 2017. Chicago, IL. 

127. Dupree, E.J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond M., Darie, C.C.  Assessment of the effects of pollutants in the Great Lakes on the human proteome. American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting (international conference). April 22-26, 2017. Chicago, IL.

126. Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Salivary Protein Biomarker Discovery in Autism Spectrum Disorder (ASD), American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting (international conference). April 22-26, 2017. Chicago, IL.

125. Aslebagh, R., Arcaro K.F., Darie C.C., Proteomics Analysis of Human Breast Milk to Assess Breast Cancer Risk. American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting (international conference). April 22-26, 2017. Chicago, IL.

124. Channaveerappa, D., Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C. Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry based Proteomics. American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting (international conference). April 22-26, 2017. Chicago, IL.

123. Dupree, E.J., Wormwood, K.L., Borland, M.M., Ryan, J.P., Charette, L., Woods, A.G., Darie, C.C.  Exploring possible biomarkers for Smith-Lemli-Opitz syndrome (SLOS) using a mass spectrometry-based proteomic investigation. Peptidomics: Bridging the Gap between Proteomics and Metabolomics by Mass Spectrometry (international conference). January 19-22, 2017. Clearwater Beach, FL.

122. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Mass Spectrometry Based Structural Characterization of Spider Peptide Phα1β, American Society for Mass Spectrometry Sanibel Conference: Peptidomics: Bridging the Gap between Proteomics and Metabolomics by Mass Spectrometry (international conference). January 19-22, 2017. Clearwater Beach, FL.

121. Dupree, E.J., Wormwood, K.L., Borland, M.M., Ryan, J.P., Charette, L., Woods, A.G., Darie, C.C.  Exploring possible biomarkers for Smith-Lemli-Opitz syndrome (SLOS) using a mass spectrometry-based proteomic investigation. Clarkson University Graduate Student Symposium, (local conference). November 17, 2016. Potsdam, NY.

120. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Structural Characterization of Spider Peptide Phα1β by Mass Spectrometry, Clarkson University Graduate Student Symposium, (local conference). November 17, 2016. Potsdam, NY.

119. Channaveerappa, D., Jacob, L., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C., Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry,  Clarkson University Graduate Research Symposium, December 2016, Potsdam, NY.

118. Dupree, E.J., Wormwood, K.L., Borland, M.M., Ryan, J.P., Charette, L., Woods, A.G., Darie, C.C.  Exploring possible biomarkers for Smith-Lemli-Opitz syndrome (SLOS) using a mass spectrometry-based proteomic investigation. Eastern Analytical Symposium & Exposition (international conference). November 13-16, 2016. Somerset, NJ.

117. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Structural Characterization of Spider Peptide Phα1β by Mass Spectrometry,  Eastern Analytical Symposium and Exposition, (international conference). November 13-16, 2016. Somerset, NJ.

116. Channaveerappa, D., Jacob, L., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C., Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry,  Eastern Analytical Symposium and Exposition (international conference), November 13-16, 2016, Somerset, NJ.

115. Duckworth, W., Brisbin, A., Wormwood, K.L., Dupree, E.J., Roberge, J., Channaveerappa, D., Kraus, P., Lufkin, T., Darie, C.C. Mass Spectrometry based proteomic investigation of annulus fibrosus and nucleus pulposus of the mature bovine intervertebral disc, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics (international conference). June 5-9, 2016. San Antonio, TX.

114. Wormwood, K.L., Borland, M., Dupree, E.J., Woods, A.G., Corbett, B., Darie, C.C. Mass Spectrometry based proteomic investigation of plasma samples from children with Autism Spectrum Disorder (ASD) and matched controls, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics (international conference). June 5-9, 2016. San Antonio, TX.

113. Channaveerappa, D., Li, K., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics (international conference). June 5-9, 2016. San Antonio, TX.

112. Aslebagh, R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk Using Different Protein Digestion procedures, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics (international conference). June 5-9, 2016. San Antonio, TX.

111. Deng, X., Aslebagh, R., Wormwood, K.L., Arcaro, K.F. & Darie, C.C. Mass Spectrometry-Based Proteomics for Identifying Breast Cancer Biomarkers in Human Breast Milk. 18th Annual Spring Symposium on Undergraduate Research Experiences.  April 16, 2016.  Clarkson University, Potsdam, NY.

110. Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Proteomic Analysis of Saliva from Children with Autism Spectrum Disorder and Matched Controls. Experimental Biology Conference: American Society for Biochemistry and Molecular Biology Annual Meeting (international conference). April 2-6, 2016. San Diego, CA.

109. Channaveerappa, D., Li, K., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines. Experimental Biology Conference: American Society for Biochemistry and Molecular Biology Annual Meeting (international conference). April 2-6, 2016. San Diego, CA.

108. Aslebagh, R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk Using Different Protein Digestion procedures. Experimental Biology Conference: American Society for Biochemistry and Molecular Biology Annual Meeting (international conference). April 2-6, 2016. San Diego, CA.

107. Chapman, C., Dupree, E.J., Borland, M., Wormwood, K.L., Woods, A.G., Darie, C.C., (2015). Proteomic Investigation of Saliva from People with Smith-Lemli-Opitz Syndrome (SLOS) and Controls. 2015 Eastern Analytical Symposium (national conference), November 16-18, 2015, Somerset, NJ.

106. Aslebagh R., Fliesler S. J., Pfeffer B. A., Darie C. C., Mass Spectrometry Based Proteomics of Oxidative Stress: Investigating of Amino Acids Modifications by 4-hydroxy-2-nonenal (HNE) Using Lysozyme and BSA as Model Proteins, Eastern Analytical Symposium and Exposition (national conference), November 2015, Somerset , NJ. 

105. Dupree, E.J.*, Roberge J.A.*,  Brisbin, A.M., Channaveerappa, D., Kraus, P.M., Lufkin, T.C., Darie, C.C. Proteomic Investigation of Annulus Fibrosus and Nucleus Pulposus of the Mature Bovine Intervertebral Disc. McNair Undergraduate Student Symposium at University of Buffalo, July 2015, Buffalo, NY.

104. Dupree, E.J.*, Roberge J.A.*,  Brisbin, A.M., Channaveerappa, D., Kraus, P.M., Lufkin, T.C., Darie, C.C. Proteomic Investigation of Annulus Fibrosus and Nucleus Pulposus of the Mature Bovine Intervertebral Disc. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

103. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015). Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. 29th Annual Symposium of the Protein Society (international conference), July 2015, Fira De Barcelona – Montjuic, Barcelona, Spain.

102. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Mass Spectrometry based Proteomics to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls. 29th Annual Symposium of the Protein Society (international conference), July 2015, Fira De Barcelona – Montjuic, Barcelona, Spain.

101. Dupree, E., Borland, M., Wormwood, K.L., Woods, A.G., Darie C. C., M Proteomic Investigation of Saliva from Patients with Smith-Lemli-Opitz Syndrome (SLOS) and Controls (2015). Northeast Regional ACS Meeting, (regional conference), June 2015, Ithaca, NY.

100. Aslebagh R., Fliesler S. J., Pfeffer B. A., Darie C. C., Mass spectrometric identification of amino acids modified by 4-hydroxy-2-nonenal (HNE) as a model for proteome-scale analysis of oxidative stress, 63nd American Society for Mass Spectrometry Conference (international conference) on Mass Spectrometry and Allied Topics, June 2015, St. Louis, MO.

99. Ngounou Wetie, A.G., Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C., (2015). Comparative two dimensional polyacrylamide gel electrophoresis (2D-PAGE) of the salivary proteome of children with autism spectrum disorder (ASD). 63rd American Society for Mass Spectrometry Conference (international conference), June 2015, St. Louis, MO.

98. Woods, A.G., Ngounou Wetie, A.G., Wormwood, K.L., Horn, S., Murrough, J., Iosifescu, D.V., Darie, C.C. (2015), Proteomic investigation of saliva samples from people with major depressive disorder treated with ketamine. 63rd American Society for Mass Spectrometry Conference (international conference), June 2015, St. Louis, MO.

97. Wormwood, K.L., Dupree, E.J., Borland, M.M., Charette, L., Woods, A.G., Darie, C.C. (2015), Proteomic investigation of saliva samples from people with Smith-Lemli-Optiz Syndrome (SLOS) and controls. 63rd American Society for Mass Spectrometry Conference (international conference), June 2015, St. Louis, MO.

96. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Breast Milk Analysis to Identify Protein Differences in Breast Cancer Samples using Mass Spectrometry, 63rd American Society for Mass Spectrometry Conference (international conference), June 2015, St. Louis, MO.

95. Ngounou Wetie, A.G., Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C., (2015). Comparative two dimensional polyacrylamide gel electrophoresis (2D-PAGE) of the salivary proteome of children with autism spectrum disorder (ASD). 33nd Annual Chemistry Graduate Student Symposium, University at Buffalo, the State University of New York (regional conference), May 2015, Buffalo, NY.

94. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, k.F., Darie, C.C., Proteomics Study of Human Breast Milk for Breast Cancer Biomarkers Discovery. 33nd Annual Chemistry Graduate Student Symposium, University at Buffalo, the State University of New York (regional conference), May 2015, Buffalo, NY.

93. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015). Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. Graduate Student Symposium (regional conference), Buffalo, NY.

92. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Proteomics Study to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls Using Mass Spectrometry. 33nd Annual Chemistry Graduate Student Symposium, University at Buffalo, the State University of New York (regional conference), May 2015, Buffalo, NY.

91. Wormwood, K.L., Ngounou Wetie, A.G., Sokolowska, I., Beglinger, K.M., Ryan, J.P., Woods, A.G., Darie, Cel C., (2015). Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. Experimental Biology Society Annual Conference, (international conference) March 2015, Boston, MA.

90. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, K.F., Darie, C.C. Proteomics Study of Human Breast Milk for Breast Cancer Biomarkers Discovery. American Society for Biochemistry and Molecular Biology (ASBMB) Experimental Biology Society Annual Conference, (international conference) March 2015, Boston, MA.

89. Channaveerappa, D., Ngounou Wetie, A.G., Lupu, L.M., Robu, A.C., Zamfir, A.D., Darie, C.C. (2015). Investigation of Tumor Differentiation Factor (TDF)-induced cell differentiation using Mass Spectrometry. American Society for Biochemistry and Molecular Biology (ASBMB) Experimental Biology Society Annual Conference, (international conference) March 2015, Boston, MA.

88. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. (2014). Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics. The First Clarkson University Graduate Student Symposium meeting (local meeting), Potsdam, NY.

87. Wormwood, K.L., Ngounou, Wetie A.G. Sokolowska, I., Beglinger, K.M.*, Ryan, J.P., Woods, A.G., Darie, C.C. (2014). Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. The First Clarkson University Graduate Student Symposium meeting (local meeting), Potsdam, NY.

86. Channaveerappa, D., Ngounou Wetie, A.G., Lupu, L.M., Robu, A.C., Zamfir, A.D., Darie, C.C. (2014). Investigation of Tumor Differentiation Factor (TDF)-induced cell differentiation using Mass Spectrometry based Proteomics (2014). The First Clarkson University Graduate Student Symposium meeting (local meeting), Potsdam, NY.

85. Dupree, E.J.*, Borland, M.*, Wormwood, K.L., Woods, A.G., Darie, C.C. (2014). Proteomic investigation of saliva from people with Smith-Lemli-Opitz Syndrome (SLOS) and controls. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

84 Lupu, L.M.*, Borland, M.*, Vukelik, Z., Darie, C. C., Zamfir, A.D. (2014). Screening and sequencing of gangliosides from human glioblastoma multiforme by high performance mass spectrometry. The Eastern Analytical Symposium meeting (national meeting), Somerset, NJ.

83 Robu, A.C.*, Borland, M.*, Sarbu, M., Darie, C. C., Peter-Katalinic, J., Zamfir, A.D. (2014). Identification of the O-glycoforms expressed in the urine of a patient suffering from Schindler disease using chip-based nanoelectrospray tandem mass spectrometry. The Eastern Analytical Symposium meeting (national meeting), Somerset, NJ.

82. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. (2014). Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics. The Eastern Analytical Symposium meeting (national meeting), Somerset, NJ.

81. Wormwood, K.L., Ngounou, Wetie A.G. Sokolowska, I., Beglinger, K.M.*, Ryan, J.P., Woods, A.G., Darie, C.C. (2014). Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. The Eastern Analytical Symposium meeting (national meeting), Somerset, NJ.

80. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., Talbot, C.*, Woods, A.G., Darie, C.C. (2014). Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. The Eastern Analytical Symposium meeting (national meeting), Somerset, NJ.

79. Channaveerappa, D., Ngounou Wetie, A.G., Lupu, L.M., Robu, A.C., Zamfir, A.D., Darie, C.C. (2014). Investigation of Tumor Differentiation Factor (TDF)-induced cell differentiation using Mass Spectrometry based Proteomics. The Eastern Analytical Symposium meeting (national meeting), Somerset, NJ.

78. Dupree, E.J.*, Borland, M.*, Wormwood, K.L., Woods, A.G., Darie, C.C. Proteomic investigation of saliva from people with Smith-Lemli-Opitz Syndrome (SLOS) and controls. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

77 Lupu, L.M.*, Vukelik, Z., Darie, C. C., Zamfir, A.D. Screening and sequencing of gangliosides from human glioblastoma multiforme by high performance mass spectrometry. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

76 Robu, A.C.*, Sarbu, M., Darie, C. C., Peter-Katalinic, J., Zamfir, A.D. Identification of the O-glycoforms expressed in the urine of a patient suffering from Schindler disease using chip-based nanoelectrospray tandem mass spectrometry. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

75. Dupree, E.J.*, Borland, M.*, Wormwood, K.L., Woods, A.G., Darie, C.C. Proteomic investigation of saliva from people with Smith-Lemli-Opitz Syndrome (SLOS) and controls. McNair Undergraduate Student Symposium at University of Buffalo, June 2014, Buffalo, NY.

74. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics, 62nd American Society for Mass Spectrometry Conference (international Conference) on Mass Spectrometry and Allied Topics, June 2014 (poster accepted), Baltimore, MD.

73. Wormwood, K.L., Dupree, E.*, Sokolowska, I., Beglinger, K.M.*, Ryan, J.P., Woods, A.G., Darie, C.C., Ngounou, Wetie A.G. Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. The American Society for Mass Spectrometry meeting (international meeting), March 2014 (abstract accepted) & June 2014 (poster accepted), Baltimore, MD.

72. Beglinger, K.M.*, Dupree, E. J.*, Wormwood, K. L., Ngounou, Wetie A.G., Skavina, R. A.*, Amaro, L.*, Ryan, J. P., Darie, C. C., Woods, A. G. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. The American Society for Mass Spectrometry meeting (international meeting), March 2014 (abstract accepted) & June 2014 (poster accepted), Baltimore, MD.

71. Petrareanu, C., Sokolowska, I., Macovei, A., Woods, A.G., Radu, L.G., Darie, C.C., Brinza-Nichita, N. Comparative proteomic analysis reveals novel components at the plasma membrane of differentiated HepaRG cells. The American Society for Mass Spectrometry meeting (international meeting), March 2014 (abstract accepted) & June 2014 (poster accepted), Baltimore, MD.

70. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., Talbot, C.*, Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. The American Society for Mass Spectrometry meeting (international meeting), March 2014 (abstract accepted) & June 2014 (poster accepted), Baltimore, MD.

69. Roy, U., Woods, A.G., Darie, C.C. , Molecular Dynamics Simulation of Tumor Differentiation Factor Peptide (TDF-P1), Poster presented at CAMP Annual Technical Meeting, May 2014, Saratoga Springs, NY.

68. Ngounou Wetie, A.G., Sokolowska, I., Roy, U.,Talbot, C.*, Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Protein and Antibody Engineering Summit (PEGS), May 2014, Boston, MA.

67. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics for Identifying Breast Cancer Biomarkers in Human Breast Milk, 32nd Annual Chemistry Graduate Student Symposium, University at Buffalo, The State University of New York at Buffalo, May 2014, Buffalo, NY.

66. Wormwood, K.L., Ngounou Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls. 32nd American Chemical Society Graduate Student Symposium at University of Buffalo, May 2014, Buffalo, NY.

65. Beglinger, K.M.*, Wawro, B.*, Wormwood, K. L., Ngounou, Wetie A.G., Skavina, R. A.*, Amaro, L.*, Dupree, E. J.*, Ryan, J. P., Woods, A. G., Darie, C. C. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. Graduate Student Symposium at University of Buffalo, May 2014, Buffalo, NY.

64. Ngounou Wetie, A.G., Sokolowska, I., Roy U., Talbot, C.*, Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Chemistry Graduate Student Symposium at the University at Buffalo, May 2014, Buffalo, NY.

63 Beglinger, K.M.*, Wawro, B.*, Wormwood, K. L., Ngounou, Wetie A.G., Skavina, R. A.*, Amaro, L.*, Dupree, E. J.*, Ryan, J. P., Woods, A. G., Darie, C. C. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. Clarkson University Spring SURE Conference, April 2014, Potsdam, NY.

62. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics for Identifying Breast Cancer Biomarkers in Human Breast Milk, 5th Annual Local ACS Undergraduate and Graduate Chemistry & Biology Research Symposium, State University of New York at Plattsburgh, April 2014, Plattsburgh, NY.

61. Wormwood, K.L., Ngounou Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls. Northern New York American Chemical Society 5th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2014, Plattsburgh, NY.

60. Beglinger, K.M.*, Wawro, B.*, Wormwood, K. L., Ngounou, Wetie A.G., Skavina, R. A.*, Amaro, L.*, Dupree, E. J.*, Ryan, J. P., Woods, A. G., Darie, C. C. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. Northern New York American Chemical Society 5th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2014, Plattsburgh, NY.

59. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., Talbot, C.*, Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. ACS NNY meeting at SUNY PLattsburgh, April 2014, Plattsburgh, NY.

58. Woods, B.L.**, Wormwood, K.L.*, Darie, C.C. Biochemical investigation of white and brown eggs, 14th Annual SUMMER Symposium on Undergraduate Research Experiences, Clarkson University, August 2013, Potsdam, NY.

57. Wormwood, K.L.*, Ngounou Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, 14th Annual SUMMER Symposium on Undergraduate Research Experiences, Clarkson University, August 2013, Potsdam, NY.

56. Beglinger, K.M.*, Ngounou Wetie A.G., Sokolowska, I., Wormwood, K.L.*, Mattingly, J.W.*, Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, The 2013 Smith-Lemli-Opitz Family and Medical Conference (national meeting), June, 2013, Pittsburgh, PA

55. Wormwood, K.L.*, Ngounou Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, The 2013 Smith-Lemli-Opitz Family and Medical Conference (national meeting), June, 2013, Pittsburgh, PA

54. Woods, A.G., Connoly, J., Ngounou Wetie, A.G., Cojocariu, C., Gethings, L., Hammond, J., Ryan, J.P., Darie, C.C. A TransOmics study of the saliva of children with autism spectrum disorder using high definition mass spectrometry. The American Society for Mass Spectrometry meeting (international meeting), March 2013 (abstract accepted) & June 2013 (poster accepted), Minneapolis, MN.

53. Petrareanu, C., Sokolowska, I., Macovei, A., Woods, A.G., Darie, C.C., Branza-Nichita N. Proteomic investigation of the mechanism of infection of Hepatitis B virus (HBV) in HepaRG cells. The American Society for Mass Spectrometry meeting (international meeting), March 2013 (abstract accepted) & June 2013 (poster accepted), Minneapolis, MN.

52. Ngounou Wetie, A.G., Sokolowska, I., Pinguang Y.*, Roy, U., Woods, A.G., Darie, C.C. Proteomic investigation of the Tumor Differentiation Factor (TDF)-induced cell differentiation. The American Society for Mass Spectrometry meeting (international meeting), March 2013 (abstract accepted) & June 2013 (poster accepted), Minneapolis, MN.

51. Sokolowska, I., Ngounou Wetie, A.G., Roy, U., Talbot, C.*, Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. The American Society for Mass Spectrometry meeting (international meeting), March 2013 (abstract accepted) & June 2013 (poster accepted), Minneapolis, MN.

50. Wormwood, K.L.*, Ngounou, Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, The American Society for Mass Spectrometry meeting (international meeting & undergraduate competition), March 2013 (abstract accepted) & June 2013 (poster accepted), Minneapolis, MN.

49. Beglinger, K.M.*, Ngounou, Wetie A.G., Sokolowska, I., Wormwood, K.L.*, Mattingly, J.W.*, Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, The American Society for Mass Spectrometry meeting (international meeting & undergraduate competition), March 2013 (abstract accepted) & June 2013 (poster accepted), Minneapolis, MN.

48. Roy, U., Sokolowska, I., Woods, A.G., Darie, C.C. Structural Investigation of Tumor Differentiation Factor (TDF) and its Receptor (TDF-R), Poster presented at CAMP Annual Technical Meeting, May16 2013, Saratoga Springs, NY.

47. Sokolowska, I., Ngounou Wetie, A.G., Talbot, C.*, Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Laboratory Science Equipment Conference and Exposition - Pittcon 2013. March 17-21, 2013, Philadelphia, PA.

46. Wormwood, K.L.*, Ngounou, Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls. Northern New York American Chemical Society 4th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2013, Canton, NY.

45. Beglinger, K.M.*, Ngounou, Wetie A.G., Sokolowska, I., Wormwood, K.L.*, Mattingly, J.W.*, Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, Northern New York American Chemical Society 4th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2013, Canton, NY. Received overall 1st place for undergraduate poster at ACS conference.

44. Wormwood, K.L.*, Ngounou, Wetie A.G., Sokolowska, I., Beglinger, K.M.*, Mattingly, J.W.*, Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, 14th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2013, Potsdam, NY. Received 1st place for cell biology and biomolecular science category at SURE conference.

43. Beglinger, K.M.*, Ngounou, Wetie A.G., Sokolowska, I., Wormwood, K.L.*, Mattingly, J.W.*, Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, 14th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2013, Potsdam, NY.

43. Wormwood, K.L.*, Butkiewicz, M.*, Woods, A. G., Ngounou Wetie, A.G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder. 14th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2012, Potsdam, NY.

42. Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Darie, C.C., Investigation of the differentiation effect of the Tumor Differentiation Factor (TDF) on breast and prostate cancer cell lines. Northern New York American Chemical Society 3rd Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2012, Potsdam, NY.

41. Baral, R., Ngounou Wetie, A.G., Darie, C.C., Wallace, K., Differential proteomics experiment on zebrafish wildtype and Pia mutants. Northern New York American Chemical Society 3rd Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2012, Potsdam, NY.

40. Sokolowska, I., Woods, A.G., Sandu, C., Darie, C.C., Tumor Differentiation Factor (TDF), novel factor identified in selected neurons of central nervous system (CNS). Northern New York American Chemical Society 3rd Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2012, Potsdam, NY.

39. Wegner, A.* & Darie, C.C., Introduction to Proteomics and its use to Identify Serum Biomarkers. Annual SUMMER Symposium on Undergraduate Research Experiences, Clarkson University, July 2011, Potsdam, NY.

38. Yakubu, R.*, Sokolowska, I., Mathur, S., Darie, C.C. Biomarker Discovery through the use of Proteomics Tools, 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

37. Butkiewicz, M.*, Woods, A. G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder. 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

36. LaFleur, M.*, Sokolowska, I., Darie, C.C., Over-expression, purification and characterization of Tumor Differentiation Factor protein, 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

35. Yakubu, R.*, Sokolowska, I., Mathur, S., Darie, C.C., Biomarker Discovery through the use of Proteomics Tools, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

34. Butkiewicz, M.*, Woods, A. G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

33. Sokolowska, I., LaFleur, M.*, Gawinowicz, M. A., Woods, A. G., Darie, C.C., Investigation of Tumor Differentiation Factor and its receptor - potential serum biomarker and therapeutic target in breast and prostate cancer, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

32. LaFleur, M.*, Sokolowska, I., Darie, C.C., Over-expression, purification and characterization of Tumor Differentiation Factor protein, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

31. Yakubu, R.*, Sokolowska, I., Mathur, S., Darie, C.C., Biomarker Discovery through the use of Proteomics Tools, Honors Program, Clarkson University, April 2011, Potsdam, NY.

30. Melissa Butkiewicz* & Costel Darie. Identification of a biomarker in autism spectrum disorders. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY

29. Martin LaFleur* & Costel Darie. The use of second dimension in the examination of proteins in sera from patients with various forms of cancer and from normal subjects. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY

28. Laura ZIelewicz* & Costel Darie. Screening for low molecular weight serum protein biomarkers for prostate and cervical cancer. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY

27. Supriya Mathur, Izabela Sokolowska, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Alisa Woods, Costel Darie. Jumping Translocation Breakpoint protein and Tumor Differentiation Factor (TDF) as serum biomarkers in patients with cancer. 37th North East Regional Meeting of the American Chemical Society, Undergraduate and graduate student poster session, June 2-5, 2010, Potsdam, NY

26. Izabela Sokolowska, Supriya Mathur, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Mary Ann Gawinowicz, Alisa Woods, Costel Darie. New proteomics approaches for biomarker discovery. 37th North East Regional Meeting of the American Chemical Society, Undergraduate and graduate student poster session, June 2-5, 2010, Potsdam, NY

25. Supriya Mathur, Izabela Sokolowska, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Alisa Woods, Costel Darie. Prostate Androgen Regulated (PAR) protein and Tumor Differentiation Factor (TDF) as serum biomarkers in sera of patients with cancer. 58th ASMS Conference on Mass Spectrometry, May 23-28, 2010, Salt Lake City, UT

24. Izabela Sokolowska, Supriya Mathur, Melissa Butkiewicz*, Rama Yakubu*, Christopher Talbot*, Jonathan Samson*, Mary Ann Gawinowicz, Alisa Woods, Costel Darie. New proteomics approaches for biomarker discovery. 58th ASMS Conference on Mass Spectrometry, May 23-28, 2010, Salt Lake City, UT

23. Darie C.C., Cardasis H.L., Deihardt K,Zhang G., Shetty V., Chao M.V., Neubert T.A. (2009). Analysis by Blue Native PAGE and mass spectrometry of protein-protein interactions within EphB2-NG108 cells in response to ephrinB1-Fc stimulation. 56th American Society for Mass Spectrometry Conference, Philadelphia, PA, USA

22. Darie C.C., Platica M., Ionescu A., Platica O. (2009). Prostate Androgen Regulated protein regulates the cell cycle. 100th American Association for Cancer Research Conference, Denver, CO, USA

21. Darie C.C. Spellman D.S., Zhang G., Shetty V., Neubert T.A. (2008). Analysis by Blue Native PAGE and mass spectrometry of protein-protein interactions within EphB2-NG108 cells in response to ephrinB1-Fc stimulation. 56th American Society for Mass Spectrometry Conference, Denver, CO, USA

20. Darie C.C. Spellman D.S.,Zhang G., Cardasis H.L., Xu C., Blais S., Fenyo D., Neubert, T.A. (2007). Analysis of the EphB2 signal transduction pathway upon ephrinB1-Fc stimulation. 1st International Conference on Applications of Mass Spectrometry in Life Safety (NATO sponsored event), Herculane, Romania

19. Darie C.C., Biniossek M. L., Gawinowicz M.A., Milgrom Y, Jovine L., Litscher E. S., Wassarman P. M. (2007). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. 1st International Conference on Applications of Mass Spectrometry in Life Safety (NATO sponsored event), Herculane, Romania

18. Spellman D.S., Cardasis H.L., Jordan B.A., Darie C. Ziff E.B., Chao M.V., Neubert T.A. (2007). SILAC in Cultured Primary Neurons: Application to BDNF Induced Phosphotyrosine Proteome Changes and Differential Protein Abundance of Postsynaptic Densities. The 55th American Society for Mass Spectrometry Conference, Indianapolis, IN, USA

17. Darie C., Spellman D.S., Shetty V., Chen W., Neubert T.A. (2007). Analysis of protein-protein interactions within EphB2-NG108 cells in response to ephrinB1-Fc stimulation. The 55th American Society for Mass Spectrometry Conference, Indianapolis, IN, USA

16. Williams Z., Litscher E.S., Darie C. C., Wassarman P.M. (2006). Rational design of a pregnancy vaccine. Obstetrics & Gynecology 107: 14-15

15. Darie C.C., Biniossek M. L., Gawinowicz M.A., Milgrom Y, Jovine L., Litscher E. S., Wassarman P. M. (2005). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. The 2005 Eastern Analytical Symposium, Somerset, NJ, USA

14. Darie C., Biniossek M. L., Gawinowicz M.A., Milgrom Y, Jovine L., Litscher E. S., Wassarman P. M. (2005). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Gordon Research Conference: Toxicogenomics. Colby-Sawyer College, New London, NH, USA

13. Wassarman P.M., Darie C., Jovine L., Litscher E.S., Qi H., Williams Z. (2004). Polypeptide domains and motifs that control assembly of zona pellucida glycoproteins. L-04. The 4th International Symposium on the Molecular and Cell Biology of Egg- and Embryo-coats. MielPearl Ise Shima, Shima, Mie Prefecture, Japan

12. Jovine L., Qi H., Williams Z., Darie C., Litscher E.S., Wassarman P.M. (2004). A duplicated motif controls assembly of ZP domain proteins. The 4th International Symposium on the Molecular and Cell Biology of Egg- and Embryo-coats. MielPearl Ise Shima, Shima, Mie Prefecture, Japan

11. Darie C., Sujak A., Haehnel W. (2002). Four dimensional isolation of the Ndh complex from maize thylakoids, Cambridge University, Cambridge, UK

10. Darie C.., Mutschler B., Biniossek M., Winter V., Haehnel W. (2002). Studies of the NAD(P)H: Plastoquinone oxidoreductase (Ndh Complex) from maize chloroplasts, The Annual German Botanical Congress, Freiburg, Germany

9. Darie C. (2001). Recombinant DNA technology, language and brain; language affinity, neuronal and genetic bases, Feldberg, BW, Germany

8. Darie C., Mutschler B., Haehnel W. (2001). Studies of the NAD(P)H: Plastoquinone oxidoreductase, Transient protein-protein complexes, Aarchus, Denmark

7. Darie C. , Drepper F., Mutschler B., Haehnel W. (2001). Isolation and functional characterization of the plastidial NAD(P)H-dehydrogenase from Zea mays, SFB 388, Zellulaere Funktionen Dynamischer Proteinwechselwirkungen, Freiburg, Germany

6. Darie C. (2001). Chlororespiration and poising of cyclic electron transport; Plastoquinone as electron transporter between thylakoid NADH-Dehydrogenase and peroxidase, Graduiertenkolleg "Biochemistry of enzymes," Feldberg, BW, Germany

5. Darie C. (2001).Two dimensional gel electrophoresis and mass spectrometry for proteome analysis, Department of Biochemistry, University of Freiburg, Germany

4. Darie C. (2001). Isolation of the Ndh complex from chloroplasts from Zea mays, 18th Photosynthesis congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Faculty of Biology, University Konstanz, Germany

3. Darie C. (2000). Plastidial NAD(P)H-dehydrogenase, Graduiertenkolleg "Biochemistry of enzymes,"Institute of Physical Chemistry, University of Freiburg, Germany

2. Darie C. (2000). Plastidial Ndh complex, 17th Photosynthesis Congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Institute for Physical Chemistry, Freiburg, Germany

1. Darie C. (1999). Isolation, cloning and expression as fusion proteins of the ndh genes of the Ndh complex (NAD(P)H:plastoquinone-oxidoreductase) from mesophyll cloroplasts from Zea mays, Department of Biology, Al.I. Cuza University, Iasi, Romania

(* represents undergraduate students)

Media Contributions

Newspaper, NCNow. (January 21, 2012).

Clarkson News. (January 19, 2012).

Newspaper, ASBMB. (January 18, 2012).

Clarkson News. (January 17, 2012).

Newspaper, Eurekalert. (January 13, 2012).

Clarkson News. (November 30, 2011).

Clarkson News. (October 13, 2011).