(* represents undergraduate students, ** represents a highschool student)

85. Whitham D, Bruno P, Haaker N*, Arcaro KF, Pentecost BT, Darie CC. Deciphering a proteomic signature for the early detection of breast cancer from breast milk: the role of quantitative proteomics. Expert Rev Proteomics. 2024 Feb 20. doi: 10.1080/14789450.2024.2320158. Epub ahead of print. PMID: 38376826.

84. Neagu AN, Whitham D, Bruno P, Arshad A, Seymour L*, Morrissiey H*, Hukovic AI**, Darie CC. Onco-Breastomics: An Eco-Evo-Devo Holistic Approach. Int J Mol Sci. 2024 Jan 28;25(3):1628. doi: 10.3390/ijms25031628. PMID: 38338903; PMCID: PMC10855488.

83. Jayathirtha M, Jayaweera T, Whitham D, Sullivan I*, Petre BA, Darie CC, Neagu AN. Two Dimensional-PAGE Coupled with nLC-MS/MS-Based Identification of Differentially Expressed Proteins and Tumorigenic Pathways in MCF7 Breast Cancer Cells Transfected for JTB Protein Silencing. Molecules. 2023 Nov 9;28(22):7501. doi: 10.3390/molecules28227501. PMID: 38005222; PMCID: PMC10673289.

82. Wormwood KL, Charette L, Ryan JP, Darie CC, Woods AG. A Proteomics Investigation of Salivary Profiles as Potential Biomarkers for Autism Spectrum Disorder (ASD). Protein J. 2023 Oct;42(5):607-620. doi: 10.1007/s10930-023-10146-0. Epub 2023 Aug 11. PMID: 37566278.

81. Jayathirtha M, Jayaweera T, Whitham D, Petre BA, Neagu AN, Darie CC. Two-Dimensional Polyacrylamide Gel Electrophoresis Coupled with Nanoliquid Chromatography-Tandem Mass Spectrometry-Based Identification of Differentially Expressed Proteins and Tumorigenic Pathways in the MCF7 Breast Cancer Cell Line Transfected for Jumping Translocation Breakpoint Protein Overexpression. Int J Mol Sci. 2023 Sep 28;24(19):14714. doi: 10.3390/ijms241914714. PMID: 37834160; PMCID: PMC10572688.

80. Aslebagh R, Whitham D, Channaveerappa D, Lowe J*, Pentecost BT, Arcaro KF, Darie CC. Proteomics analysis of human breast milk by two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) coupled with mass spectrometry to assess breast cancer risk. Electrophoresis. 2023 Jul;44(13-14):1097-1113. doi: 10.1002/elps.202300040. Epub 2023 Apr 10. PMID: 36971330; PMCID: PMC10522790.

79. Neagu AN, Whitham D, Bruno P, Morrissiey H*, Darie CA**, Darie CC. Omics-Based Investigations of Breast Cancer. Molecules. 2023 Jun 14;28(12):4768. doi: 10.3390/molecules28124768. PMID: 37375323; PMCID: PMC10302907.

78. Point AD, Crimmins BS, Holsen TM, Fernando S, Hopke PK, Darie CC. Can blood proteome diversity among fish species help explain perfluoroalkyl acid trophodynamics in aquatic food webs? Sci Total Environ. 2023 Jun 1;875:162337. doi: 10.1016/j.scitotenv.2023.162337. Epub 2023 Feb 26. PMID: 36848995.

77. Neagu AN, Whitham D, Seymour L*, Haaker N*, Pelkey I*, Darie CC. Proteomics-Based Identification of Dysregulated Proteins and Biomarker Discovery in Invasive Ductal Carcinoma, the Most Common Breast Cancer Subtype. Proteomes. 2023 Apr 3;11(2):13. doi: 10.3390/proteomes11020013. PMID: 37092454; PMCID: PMC10123686.

76. Whitham D, Belenkiy E, Darie CC, Radu A. Proteomics Analysis of Lymphoblastoid Cell Lines from Patients with Amyotrophic Lateral Sclerosis. Molecules. 2023 Feb 21;28(5):2014. doi:10.3390/molecules28052014. PMID: 36903260; PMCID: PMC10004326.

75. Tverdokhlebova A, Sterin I, Darie CC, Katz E, Smutok O. Stimulation-Inhibition of Protein Release from Alginate Hydrogels Using Electrochemically Generated Local pH Changes. ACS Appl Mater Interfaces. 2022 Dec 28;14(51):57408-57418. doi: 10.1021/acsami.2c17914. Epub 2022 Dec 14. PMID: 36516447.

74. Jayathirtha M, Whitham D, *Alwine S, *Donnelly M, Neagu AN, Darie CC. Investigating the Function of Human Jumping Translocation Breakpoint Protein (hJTB) and Its Interacting Partners through In-Solution Proteomics of MCF7 Cells. Molecules. 2022 Nov 28;27(23):8301. doi: 10.3390/molecules27238301. PMID: 36500393; PMCID: PMC9740069.

73. Aslebagh R, Whitham D, Channaveerappa D, *Mutsengi P, Pentecost BT, Arcaro KF, Darie CC. Mass Spectrometry-Based Proteomics of Human Milk to Identify Differentially Expressed Proteins in Women with Breast Cancer versus Controls. Proteomes. 2022 Oct 28;10(4):36. doi: 10.3390/proteomes10040036. PMID: 36412635; PMCID: PMC9680319.

72. Neagu AN, Jayathirtha M, Whitham D, *Mutsengi P, *Sullivan I, Petre BA, Darie CC. Proteomics-Based Identification of Dysregulated Proteins in Breast Cancer. Proteomes. 2022 Oct 21;10(4):35. doi: 10.3390/proteomes10040035. PMID: 36278695; PMCID: PMC9590004.

71. Darie-Ion L, Whitham D, Jayathirtha M, *Rai Y, Neagu AN, Darie CC, Petre BA. Applications of MALDI-MS/MS-Based Proteomics in Biomedical Research. Molecules. 2022 Sep 21;27(19):6196. doi: 10.3390/molecules27196196. PMID: 36234736; PMCID: PMC9570737.

70. Jayathirtha M, Neagu AN, Whitham D, *Alwine S, Darie CC. Investigation of the effects of downregulation of jumping translocation breakpoint (JTB) protein expression in MCF7 cells for potential use as a biomarker in breast cancer. Am J Cancer Res. 2022 Sep 15;12(9):4373-4398. PMID: 36225631; PMCID: PMC9548009.

69. Jayathirtha M, Neagu AN, Whitham D, *Alwine S, Darie CC. Investigation of the effects of overexpression of jumping translocation breakpoint (JTB) protein in MCF7 cells for potential use as a biomarker in breast cancer. Am J Cancer Res. 2022 Apr 15;12(4):1784-1823. PMID: 35530281; PMCID: PMC9077082.

68. Neagu AN, Jayathirtha M, *Baxter E, *Donnelly M, Petre BA, Darie CC. Applications of Tandem Mass Spectrometry (MS/MS) in Protein Analysis for Biomedical Research. Molecules. 2022 Apr 8;27(8):2411. doi: 10.3390/molecules27082411. PMID: 35458608; PMCID: PMC9031286.

67. Dube, D.K., Wang, J, Fan, Y., Dube, S., Abbott, L., Sanger, J.M., Channaveerappa, D., Darie, C.C., Poiesz, B.J., Sanger, J.W. (2021). Effect of MG-132 on myofibrillogenesis and the ubiquitination of GAPDH in quail myotubes in vitro. Cytoskeleton (Hoboken). 2021 Oct 26. doi: 10.1002/cm.21690. Online ahead of print. PMID: 34698442.

66. Dupree, E.J., *Manzoor, Z., *Alwine, S., Crimmins, B.S., Holsen, T.M., Darie, C.C. (2021). Proteomic Analysis of the Lake Trout (Salvelinus namaycush) Heart and Blood: the beginning of a comprehensive lake trout protein database. Proteomics. 2021 Oct 22:e2100146. doi: 10.1002/pmic.202100146. Online ahead of print. PMID: 34676671.

65. Qi, Q., Sekhon, G., Chandradat, R., Ofodum, N.M., Shen, T., Scrimgeour, J., Joy, M., Wriedt, M., Jayathirtha, M., Darie, C.C., Shipp, D.A., Liu, X., Lu, X. (2021). Force-Induced Near-Infrared Chromism of Mechanophore-Linked Polymers. J Am Chem Soc. 2021 Sep 29. doi: 10.1021/jacs.1c05923. Epub ahead of print. PMID: 34586805.

64. Neagu, A.N., Whitham, D., *Buonanno, E., *Jenkins, A., Alexa-Stratulat, T., Tamba, B.I., Darie, C.C. (2021). Proteomics and its applications in breast cancer. Am J Cancer Res 2021;11(9):4006-4049. PMID: 34659875. 

63. Mihasan, M., Boiangiu, R.S., Guzun, D., Babii, C., Aslebagh, R., Channaveerappa, D., Dupree, E.J., Darie, C.C. (2021). Time-Dependent Analysis of Paenarthrobacter nicotinovorans pAO1 Nicotine-Related Proteome. ACS Omega 2021, 6, 22, 14242–14251. DOI: 10.1021/acsomega.1c01020.

62. Liu, S., Qureshi, N., Bischoff, K., Darie, C.C. (2021). Proteomic Analysis Identifies Dysregulated Proteins in Butanol-Tolerant Gram-Positive Lactobacillus mucosae BR0713-33. ACS Omega. 2021 Jan 28;6(5):4034-4043. doi: 10.1021/acsomega.0c06028. PMID: 33644533; PMCID: PMC7906490.

61. Jayathirtha, M., Dupree, E.J., *Manzoor, Z., *Larose, B., *Sechrist, Z., Neagu, A., Petre, B.A., Darie, C.C. (2021). Mass Spectrometric (MS) Analysis of Proteins and Peptides. Current Protein & Peptide Science, 2021:22(2):92-120, doi: 10.2174/1389203721666200726223336. PMID: 32713333.

60. Boolani, A., Fuller, D.T., Mondal, S., Wilkinson, T., Darie, C.C., Gumpricht, E. (2020). Caffeine-Containing, Adaptogenic-Rich Drink Modulates the Effects of Caffeine on Mental Performance and Cognitive Parameters: A Double-Blinded, Placebo-Controlled, Randomized Trial. Nutrients. 2020 Jun 29;12(7):1922. doi: 10.3390/nu12071922. PMID: 32610481; PMCID: PMC7399841.

59. Kendrick, N., Powers, G., Johansen, J., Hoelter, M., Koll, A., Carlson, S., Channaveerappa, D., Darie, C.C. (2020). Preparation of a phosphotyrosine-protein standard for use in semiquantitative western blotting with enhanced chemiluminescence. PLoS One; 2020 Jun 18;15(6):e0234645. doi: 10.1371/journal.pone.0234645. PMID: 32555693; PMCID: PMC7302481.

58. Dupree, E.J., Jayathirtha, M., *Yorkey, H., Mihasan, M., Petre, B.A., Darie, C.C. (2020). A Critical Review of Bottom-Up Proteomics: The Good, the Bad, and the Future of this Field. Proteomes. 2020, Jul 6;8(3):14. doi: 10.3390/proteomes8030014. PMID: 32640657; PMCID: PMC7564415.

57. Dupree, E.J., Crimmins, B.S., Holsen, T.M., Darie, C.C. (2019). Proteomic Analysis of the Lake Trout (Salvelinus namaycush) Liver Identifies Proteins from Evolutionarily Close and -Distant Fish Relatives. Proteomics. 2019 Dec;19(24):e1800429. doi: 10.1002/pmic.201800429. Epub 2019 Nov 12. PubMed PMID: 31578773.

56. *Lux, J.C., Channaveerappa, D., Aslebagh, R., Heintz, T.A., McLerie, M., Panama, B.K., Darie C.C. (2019). Identification of dysregulation of atrial proteins in rats with chronic obstructive apnea using two‐dimensional polyacrylamide gel electrophoresis and mass spectrometry, J. Cell. Mol. Med., Apr;23(4):3016-3020. doi: 10.1111/jcmm.14131 

55. Mihăşan, M., Babii, C., Aslebagh, R., Channaveerappa, D., Dupree, E.J., Darie, C.C. (2018). Proteomics based analysis of the nicotine catabolism in Paenarthrobacter nicotinovorans pAO1. Sci Rep. 2018 Nov 2;8(1):16239. doi: 10.1038/s41598-018-34687-y.

54. Aslebagh, R., Channaveerappa, D., Arcaro, F.K., Darie, C.C. (2018). Comparative Two-Dimensional Polyacrylamide Gel Electrophoresis (2D-PAGE) of Human Milk to Identify Dysregulated Proteins in Breast Cancer. Electrophoresis, May 13, doi: 10.1002/elps.201800025.

53. Wormwood, K.L., Ngounou Wetie, A.G., Gomez, M.V., Ju, Y., Kowalski, P., Mihasan, M., Darie, C.C. (2018). Structural Characterization and Disulfide Assignment of Spider Peptide Phα1β by Mass Spectrometry. J Am Soc Mass Spectrom. May;29(5):827-841. doi: 10.1007/s13361-018-1904-3.

52. Aslebagh, R., Channaveerappa D., Arcaro, F.,K., Darie C.C. (2018). Proteomics Analysis of Human Breast Milk to Assess Breast Cancer Risk. Electrophoresis, 39(4):653–665, doi: 10.1002/elps.201700123.

51. Aslebagh, R., Wormwood, K. L., Channaveerappa, D., Dupree, E. J., Sokolowska, I., Ngounou Wetie, A.G., Patel, S., Mihasan, M., Woods, A.G. Darie, C. C. (2017). Proteomics of the Post-translational Modifications: the knowns and the unknowns. Molecular Life. Vol 1 No 1, 29-42, Vol 1 No 1, 29-42, (doi: 10.26600/MolLife.1.1.4.2017).

50. Scheja, S., Domanskyi, S., Gamella, M., Wormwood, K. L., Darie, C. C., Poghossian, A., Schöning, M. J., Melman, A., Privman, V. and Katz, E. (2017), Glucose-triggered Insulin Release from Fe3+-cross-linked Alginate Hydrogel: Experimental Study and Theoretical Modeling. ChemPhysChem. 017 Jun 20;18(12):1541-1551. doi: 10.1002/cphc.201700195. Epub 2017 May 2.

49. Honarvarfard, E., Gamella, M., Channaveerappa, D., Darie, C.C., Poghossian, A., Schöning, M., Katz, E. (2017), Electrochemically Stimulated Insulin Release from a Modified Graphene–functionalized Carbon Fiber Electrode. Electroanalysis. 2017, 29, 1543-1553, Version of Record online: 3 MAR 2017, doi: 10.1002/elan.201700095.

48. Channaveerappa, D., *Lux, J., Wormwood, K.L., Heintz, T. A., Nassar, D.., Goodroq, R.J., McLerie, M., Ballard, G., Decker, R., Darie, C. C., Panama, B. K. (2017) Atrial electrophysiological and molecular remodelling induced by obstructive sleep apnea. J. Cell. Mol. Med. 2017 Sep;21(9):2223-2235. Apr 12. doi: 10.1111/jcmm.13145.

47. Patel, S.J., Trivedia, G.L., Darie, C.C, Clarkson, B.D. (2017). The Possible Roles of B-Cell Novel Protein-1 (BCNP1) in Cellular Signaling Pathways and in Cancer. J Cell Mol Med.  Mar;21(3):456-466. doi: 10.1111/jcmm.12989. Epub Sep 29. 

46. Patel, S.J., Darie, C.C, Clarkson, B.D. (2017). Effect of purified fractions from cell culture supernate of high-density pre-B acute lymphoblastic leukemia cells (ALL3) on the growth of ALL3 cells at low density. Electrophoresis. Feb;38(3-4):417-428. doi: 10.1002/elps.201600399.

45. Aslebagh, R., Pfeffer, B.A., Fliesler, S.J., Darie, C.C. (2016). Mass spectrometry-based proteomics of oxidative stress:  Identification of 4-hydroxy-2-nonenal (HNE) adducts of amino acids using lysozyme and bovine serum albumin as model proteins. Electrophoresis. Oct;37(20):2615-2623. doi: 10.1002/elps.201600134. Epub 2016 Jun 7.

44. Patel, S.J., Darie, C.C, Clarkson, B.D. (2016). Exosome mediated growth effect on the non-growing pre-B acute lymphoblastic leukemia cells at low cell starting cell density. Am J Transl Res. 2016 Sep 15;8(9):3614-3629.

43. Patel, S.J., Dao, S., Darie, C.C, Clarkson, B.D. (2016). Defective Quorum Sensing of Acute Lymphoblastic Leukemic Cells: Evidence of Collective Behavior of Leukemic Populations as Semi-Autonomous Aberrant Ecosystems. Am J Cancer Res; 6(6):1177-230.

42. Ngounou Wetie, A.G., Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. (2015). Comparative two dimensional polyacrylamide gel electrophoresis (2D-PAGE) of the salivary proteome of children with autism spectrum disorder (ASD). J. Cell. Mol. Med. 2015 Nov;19(11):2664-78. doi: 10.1111/jcmm.12658. 

41. Gamella, M., Guz, N., Pingarrón, J.M., Aslebagh, R., Darie, C.C., Katz, E. (2015). A bioelectronic system for insulin release triggered by ketone body mimicking diabetic ketoacidosis in vitro. Chem Commun (Camb). 2015 Apr 21;51(36):7618-21. doi: 10.1039/c5cc01498k.

40. Wormwood, K.L., Aslebagh, R., Channaveerappa, D., *Dupree, E.J., *Borland, M.M., Ryan, J.P, Darie, C.C., Woods, A.G. (2015). Salivary proteomics and biomarkers in neurology and psychiatry. Proteomics Clinical Applications: 2015 Jan 29. doi: 10.1002/prca.201400153.

39. Ngounou Wetie, A.G., Wormwood, K.L., Russell, S., Ryan, J.P., Darie, C.C., Woods, A.G. (2015). A pilot proteomic analysis of salivary biomarkers in autism spectrum disorder. Autism Research. 2015 Jan 27. doi: 10.1002/aur.1450.

38. Woods, A.G., Wormwood, K.L., Ngounou Wetie, A.G., Aslebagh, R., Crimmins, B.S., Holsen, T.M., Darie, C.C. (2014). Autism Spectrum Disorders: an omics perspective. Proteomics Clinical Applications Feb;9(1-2):159-68. doi: 10.1002/prca.201400116. 

37. Ngounou Wetie, A. G., Wormwood, K., Thome, J., Dudley, E., Taurines, R., Gerlach, M., Woods, A.G., Darie, C. C. (2014). A pilot proteomic study of protein markers in autism spectrum disorder. Electrophoresis, doi: 10.1002/elps.201300370.

36. Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Roy, U., Deinhardt, K., Darie, C.C. (2014) Protein-protein interactions: Switch from classical methods to proteomics-based approaches. Cellular and Molecular Life Sciences, 71(2):205-28.

35. Sokolowska, I., Ngounou Wetie, A.G., *Wormwood, K., Thome, J., Darie, C.C., Woods, A.G. Biomarkers in psychiatry (2013). The potential of biomarkers in psychiatry: focus on proteomics. Journal of Neural Transmission, 1-10.

34. *Wormwood, K.L., Sokolowska, I., Ryan, J.P., *Russell, S., Darie, C. C., Woods, A. G. (2013). The Potential for Proteomics in Understanding Neurodevelopmental Disorders. J. Proteomics Bioinform. S5.

33. Roy, U., Woods, A.G., Sokolowska, I., Darie, C.C. (2013). Structural Evaluation and Analyses of Tumor Differentiation Factor. Protein Journal, 32(7):512-8.

32. Petrareanu, C., Macovei, A., Sokolowska, I., Woods, A.G., Darie, C.C., Lucian, D., Branza-Nichita N. (2013). Comparative Proteomics Reveals Novel Components at the Plasma Membrane of Differentiated HepaRG Cells and Different Distribution in Hepatocyte- and Biliary-Like Cells. PLoS ONE 8(8): e71859. 

31. Ngounou Wetie, A.G., Sokolowska, I., *Wormwood, K.L., *Beglinger, K., Michel, T.M., Thome, J., Darie, C.C., Woods, A.G. (2013). Mass spectrometry methods for the detection of psychiatric biomarkers. Journal of Molecular Psychiatry, 1:8.

30. Ngounou Wetie, A.G., Sokolowska, I., J., Woods, A.G., Darie, C.C. (2013). Identification of post-translational modifications by mass spectrometry. Australian Journal of Chemistry, 66, 734-748.

29. Woods, A. G., Ngounou Wetie, A.G., Sokolowska, I., *Russell, S., Ryan, J.P., Michel, T.M., Thome, J., Darie, C. C. (2013). Mass spectrometry as a tool for studying autism spectrum disorder. Journal of Molecular Psychiatry, 1: 6.

28. Sokolowska, I., Ngounou Wetie, A.G., Woods, A.G., Darie, C.C. (2013) Applications of mass spectrometry in proteomics. Australian Journal of Chemistry. 66, 721-733.

27. Woods, A.G., Sokolowska, I., Deinhardt, K., Sandu, C., Darie, C.C. (2013). Identification of Tumor Differentiation Factor (TDF) in select CNS neurons. Brain structure and function, 70:2835-2848.

26. Florian, P.F., Macovei. A., Lazar, L., Milac, A.L., Sokolowska, I., Darie, C.C., Evans, R.W., Roseanu, A., Branza-Nichita, N. (2013). Characterization of the anti-HBV activity of lactoferrin-derived peptides. Journal of Medical Virology, 85(5):780-8.

25. Sokolowska, I., Ngounou Wetie, A.G., Roy, U., Woods, A.G., Darie, C.C. (2013) Mass spectrometry investigation of glycosylation on the NXS/T sites in recombinant glycoproteins. Biochimica et Biophysica Acta - Proteins & Proteomics, 1834(8):1474-83.

24. Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Roy, U., Loo, J.A., Darie, C.C. (2013). Investigation of stable and transient protein-protein interactions: past, present and future. Proteomics, 13(3-4):538-57.

23. Roy, U., Sokolowska, I., Woods, A.G., Darie, C.C. (2012). Structural investigation of tumor differentiation factor. Biotechnology and Applied Biochemistry, 59(6):445-50.

22. Sokolowska, I., Woods, A.G., Gawinowicz, M.A., Roy, U., Darie, C.C. (2012). Characterization of tumor differentiation factor (TDF) and its receptor (TDF-R). Cellular and Molecular Life Sciences, 70 (16), 2835-2848.

21. Sokolowska, I., Gawinowicz, M. A., Ngounou, A. G., Darie, C.C. (2012). Disulfide proteomics for identification of extracellular or secreted proteins. Electrophoresis, 33(16):2527-36. 

20. Ngounou, A. G., Sokolowska, I., Woods, A. G., *Wormwood, K. L., Dao, S., Patel, S., Clarkson, B. D., Darie, C.C. (2012) Automated Mass Spectrometry-based functional assay for the routine analysis of the secretome. Journal of Laboratory Automation, 18(1):19-29. 

19. Sokolowska, I., Dorobantu, C., Woods, A.G., Macovei, A., Branza-Nichita N, Darie, C.C. (2012). Proteomic analysis of plasma membranes isolated from undifferentiated and differentiated HepaRG cells. Proteome Science, 10:47.

18. Sokolowska, I., Woods, A. G., Gawinowicz, M. A., Roy, U., Darie, C.C.  (2012) Identification of a potential tumor differentiation factor (TDF) receptor from steroid-responsive and steroid-resistant prostate cancer cells. FEBS Journal, 279 (14): 2579-94.

17. Sokolowska, I., Ngounou, A. G., Woods, A. G., Darie, C.C.  (2012). Automatic determination of disulfide bridges in proteins. Journal of Laboratory Automation, 17(6):408-16. 

16. Woods, A. G., Sokolowska, I., Darie, C.C. (2012). Identification of consistent alkylation of cysteine-less peptides in a proteomics experiment. Biochemical and Biophysical Research Communications, 419 (2): 305-8.

15. Sokolowska, I., Woods, A.G., Gawinowicz, M. A., Roy, U., Darie, C.C. (2012).  Identification of a potential tumor differentiation factor (TDF) receptor from steroid-responsive and steroid-resistant breast cancer cells.  Journal of Biological Chemistry, 287(3), 1719-33.

14. Woods, A.G., Sokolowska, I., Taurines, R., Gerlach, M. Dudley, E., Thome, J., Darie, C.C. (2012).  Potential biomarkers in psychiatry: focus on the cholesterol system.  Journal of Cellular and Molecular Medicine, 16 (6):1184-1195.

13. Darie, C.C., Deinhardt, K., Zhang., G., Cardasis, H., Chao, M., Neubert, T.A.  (2011). Identifying transient protein-protein interactions in EphB2 signaling by Blue Native PAGE and Mass Spectrometry.  Proteomics, 11(23), 4514-28.

12. Thome, J., Coogan, A. N., Woods, A.G., Darie, C.C., Hassler, F. (2011).  CLOCK Genes and Circadian Rhythmicity in Alzheimer Disease.  Journal of Aging Research, 2011:38309. 

11. Darie, C.C., Janssen, W.G., Litscher, E.S., Wassarman, P.M. (2008). Purified trout egg vitelline envelope proteins VEβ and VEγ polymerize into homomeric fibrils from dimers in vitro. Biochimica et Biophysica Acta - Proteins and Proteomics, 1784 (2):385-392.

10. Spellman, D.S., Deinhardt, K, Darie, C.C., Chao, M.V., Neubert, T.A. (2008). Stable Isotopic Labeling of Amino Acids in cultured primary neurons: application to BDNF-dependent phosphotyrosine-associated signaling.signal. Molecular & Cellular Proteomics, 7 (6):1067-1076.

9. Litscher, E.S., Janssen, W.G., Darie, C.C., Wassarman, P.M. (2008). Purified mouse egg zona pellucida glycoproteins polymerize into homomeric fibrils under non-denaturing conditions. Journal of Cellular Physiology, 214 (1): 153-157.

8. Darie, C.C., De Pascalis, L., Mutschler, B., Haehnel, W. (2006). Studies of the Ndh complex and photosystem II from mesophyll and bundle sheath chloroplasts of the C4-type plant Zea mays. Journal of Plant Physiology, 163 (8): 800-808.

7. Darie, C.C., Biniossek, M.L., Gawinowicz, M.A., Milgrom, Y, Thumfart, J.O., Jovine, L., Litscher, E.S., Wassarman, P.M. (2005). Mass spectrometric evidence that proteolytic processing of rainbow trout egg vitelline envelope proteins takes place on the egg.  Journal of Biological Chemistry, 280 (45): 37585-37598.

6. Jovine, L., Darie, C.C., Litscher, E.S., Wassarman, P.M. (2005). ZP domain proteins and glycoproteins. Annual Reviews in Biochemistry, 74: 83-114.

5. Darie, C.C., Biniossek, M.L., Winter, V., Mutschler, B., Haehnel, W. (2005). Isolation and structural characterization of the Ndh complex from mesophyll and bundle sheath chloroplasts of Zea mays.  FEBS Journal, 272: 2705-2712.

4. Wassarman,  P.M., Jovine L., Qi H., Williams Z., Darie C., Litscher E. (2005). Recent aspects of mammalian fertilization research. Molecular & Cellular Endocrinology, 234 (1-2): 95-103.

3. Darie, C.C., Biniossek, M.L., Jovine, L., Litscher, E.S., Wassarman, P.M. (2004). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry.  Biochemistry, 43: 7459-7478.

2. Artenie, V., Godja, A., Naum, E.,  Darie,  C. (1999). Glutathione-peroxidase activity from sanguine serum in patients with different mental diseases. Journal of Medical Biochemistry (J. Cell. Mol. Med.), 3: 73-78.

1. Darie, C., Jerca, L., Artenie, V., Margina, A. (1998). Glutathione peroxidase, an oxidative stress biomarker, in the menstrual cycle.  Rev. Med. Chir. Soc. Med. Nat. 102: 138-144.

(* represents undergraduate students, ** represents high school students)

19. Dupree, E.J., Darie, C.C. (2020). Examination of a non-invasive biomarker for the diagnosis of prodromal Alzheimer's disease and Alzheimer's disease Dementia. EBioMedicine. Jul;57:102882. doi: 10.1016/j.ebiom.2020.102882. Epub 2020 Jul 7. PMID: 32650274; PMCID: PMC7341362.

18. *Kelley, M., Ngounou Wetie, A.G., Darie, C.C. (2014). Correlation between Bisphenol A exposure and adverse health effects. Modern Chemistry & Applications, 2015, 3:147, doi:10.4172/2329-6798.1000147.

17.  Hutanu, D., Frishberg, M.D., Guo, L., Darie, C.C. (2014). Recent Applications of Polyethylene Glycols (PEGs) and PEG Derivatives. Modern Chemistry & Applications, 2: 132. doi:10.4172/2329-6798.1000132.

16. Roy, U., Woods, A.G., Sokolowska, I., and Darie, C.C. (2014) Structural investigation of HSP70-HSP90 and HSP90-TDF interactions. Modern Chemistry & Applications, 2:126.

15. *Gooding, R.C., *Yeaton, J., *Wallace, F., *McTarnaghan, E., Ngounou Wetie, A.G., Sokolowska, I., Darie, C.C. (2014). What’s in your yogurt? A proteomic investigation. Modern Chemistry & Applications, 2:121.

14. Robu, A., Lupu, L., Aslebagh, R., Zamfir, A.D., Darie, C.C. (2014). Advances in mass spectrometry for glycoscreening and sequencing in biomedical research. Modern Chemistry & Applications, 2: 138. doi:10.4172/2329-6798.1000138.

13. Wormwood, K.L., *Dupree, E.J., Darie, C.C., Woods, A.G. (2014). Environmental influences on Biochemistry in Autism Spectrum Disorder. Autism-Open Access 4: e123. doi:10.4172/2165-7890.1000e123.

12. Wormwood, K.L., Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Darie, C.C. (2014). Challenges in Structural Investigation of Transient Protein-Protein Interactions. Modern Chemistry & Applications, 2:1.

11. Hutanu, D., Darie, C.C. (2014). Trends in Characterization of PEGylated Proteins by Mass Spectrometry. Modern Chemistry & Applications, 2:2.

10. *Beglinger, K.M., *Wormwood, K.L., *Mattingly, J.W., *Larlee, C.R., **Woods, B., *Wawro, B., Darie, C.C. (2013) Mass Spectrometry in an Undergraduate Setting: Clarkson University. Modern Chemistry & Applications, 1:112.

9. Woods, A.G., *Wormwood, K.L., Ngounou Wetie, A.G., Ryan, J.P., Darie, C. C. (2013). Proteomics and cholesterol in autism. Autism, 3:2.

8. Roy, U., Sokolowska, I., Woods, A.G., and Darie, C.C. (2013) Tumor Differentiation Factor (TDF) and its Receptor (TDF-R): Is TDF-R an Inducible Complex with Multiple Docking Sites? Modern Chemistry & Applications, 1:108.

7. *Beglinger, K.M., *Zielewicz, L., Ngounou Wetie, A.G., Darie, C.C. (2013). Analysis of proteins bound to contact lenses. Modern Chemistry & Applications, 1:114. 

6. *Wormwood, K.L., Ngounou Wetie, A.G., *Beglinger, K.M., *Mattingly, J.W., *Larlee, C.R., Woods, A.G., Darie, C. C. (2013). Using mass spectrometry to investigate protein biomarkers. Analele Stiintifice ale Universitatii Al. I. Cuza Iasi, Sectiunea IIA, Genetica si Biologie Moleculara, 14:3.

5. Hutanu, D., Woods, A.G., Darie, C.C. (2013). Recent Applications of Mass Spectrometry in Paint Analysis. Modern Chemistry & Applications, 1:109.

4. Darie, C.C. (2013). Post-Translational Modification (PTM) Proteomics: Challenges and Perspectives. Modern Chemistry & Applications, 1:e114.

3. Darie, C.C. (2013). Investigation of Protein-Protein Interactions by Blue Native-PAGE & mass spectrometry. Modern Chemistry & Applications, 1:e111.

2. Darie, C.C. (2013). Mass Spectrometry and Proteomics: Principle, Workflow, Challenges and Perspectives. Modern Chemistry & Applications, 1:e105.

1. Darie, C.C. (2013). Mass Spectrometry and its Applications in Life Sciences. Australian Journal of Chemistry, 66, 719-720.

2. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140, doi: 10.1007/978-3-030-15950-4. 2nd Edition. 813 pages.

1. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806, doi: 10.1007/978-3-319-06068-2. 1st Edition. 600 pages.

(* represents undergraduate students)

36. Jayathirtha, M., *Whitham, D., *Stradtman, S., Darie, C.C. (2019). Recent Applications of Mass Spectrometry at Clarkson University. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:771-785. 

35: Channaveerappa, D., Ngounou Wetie, A.G., Darie, C.C. (2019). Bottlenecks in Proteomics: An Update. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:753-769. 

34. Andrei, V., Copolovici, D., Munteanu, F.D., Ngounou Wetie, A.G., Mihai, I., Darie, C.C., Vasilescu, A. (2019). Detection of Biomedically Relevant Stilbenes from Wines by Mass Spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:665-684.

33. Boolani, A., Channaveerappa, D., Dupree, E.J., Jayathirtha, M., Aslebagh, R., *Grobe, S., Wilkinson, T., Darie, C.C. (2019). Trends in Analysis of Cortisol and Its Derivatives. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:649-664. 

32. Dupree, E.J., *Goodwin, A., Darie, C.C., Boolani, A. (2019). A Pilot Exploratory Proteomics Investigation of Mental Fatigue and Mental Energy. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:601-611.

31. Woods, A.G., Wormwood, K.L., Iosifescu, D.V., Murrough, J., Darie, C.C. (2019). Protein Biomarkers in Major Depressive Disorder: An Update. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:585-600.

30. Kendrick, N., Darie, C.C., Hoelter, M., Powers, G., Johansen, J. (2019). 2D SDS PAGE in Combination with Western Blotting and Mass Spectrometry Is a Robust Method for Protein Analysis with Many Applications. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:563-574.

29. Channaveerappa, D., Panama, B.K., Darie, C.C. (2019). Mass Spectrometry Based Comparative Proteomics Using One Dimensional and Two Dimensional SDS-PAGE of Rat Atria Induced with Obstructive Sleep Apnea. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:541-561.

28. Mihăşan, M., Babii, C., Aslebagh, R., Channaveerappa, D., Dupree, E.J., Darie, C.C. (2019). Exploration of Nicotine Metabolism in Paenarthrobacter nicotinovorans pAO1 by Microbial Proteomics. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:515-529. 

27. Wormwood, K.L., Ngounou Wetie, A.G., Ryan, J.P., Darie, C.C., Woods, A.G. (2019). Mass Spectrometry for the Study of Autism and Neurodevelopmental Disorders. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:477-499.

26. Aslebagh, R., Channaveerappa, D., Pentecost, B.T., Arcaro, K.F., Darie, C.C. (2019). Combinatorial Electrophoresis and Mass Spectrometry-Based Proteomics in Breast Milk for Breast Cancer Biomarker Discovery. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:451-467. 

25. Sokolowska, I., Ngounou Wetie, A.G., Woods, A.G., Jayathirtha, M., Darie, C.C. (2019). Role of Mass Spectrometry in Investigating a Novel Protein: The Example of Tumor Differentiation Factor (TDF). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:417-433. 

24. Dupree, E.J., Crimmins, B.S., Holsen, T.M., Darie, C.C. (2019). Developing Well-Annotated Species-Specific Protein Databases Using Comparative Proteogenomics. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:389-400. 

23. Mihăşan, M., Wormwood, K.L., Sokolowska, I., Roy, U., Woods, A.G., Darie, C.C. (2019). Mass Spectrometry- and Computational Structural Biology-Based Investigation of Proteins and Peptides. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:265-287. 

22. Jayathirtha, M., Darie, C.C. (2019). Investigation of Antibody-Drug Conjugates by Mass Spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:251-263.

21. Aslebagh, R., Wormwood, K.L., Channaveerappa, D., Wetie, A.G.N., Woods, A.G., Darie, C.C. (2019). Identification of Posttranslational Modifications (PTMs) of Proteins by Mass Spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:199-224. 

20. Ngounou Wetie, A.G., Sokolowska, I., Channaveerappa, D., Dupree, E.J., Jayathirtha, M., Woods, A.G., Darie, C.C. (2019). Proteomics and Non-proteomics Approaches to Study Stable and Transient Protein-Protein Interactions. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:121-142. 

19. Woods, A.G., Sokolowska, I, Ngounou Wetie, A.G., Channaveerappa, D., Dupree, E.J., Jayathirtha, M., Aslebagh, R., Wormwood, K.L., Darie CC. (2019). Mass Spectrometry for Proteomics-Based Investigation. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 1140:1-26. 

18. Aslebagh, R., Estifaee, P., Mededovic Thagard, S., Darie, C.C. (2016). Applications of Mass Spectrometry in Forensic Science: A Brief Introduction, in Forensic Science: A Multidisciplinary Approach, Editors: Katz, E. & Halamek, J., Wiley-VCH, Weinheim, Germany, 71-87. ISBN: 978-3-527-33894-8.

17. Ngounou Wetie, A.G., Shipp, D.A., Darie, C.C. (2014). Bottlenecks in proteomics. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 581-93.

16. Woods, A.G., Iosifescu, D.V., Darie, C.C. (2014). Biomarkers in Major Depressive Disorder: the role of mass spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 545-60.

15. Ngounou Wetie, A.G., DeKroon, R.M., Mocanu, M., Ryan, J.P., Darie, C.C., Woods, A.G. (2014). Mass Spectrometry for the Study of Autism and Neurodevelopmental Disorders. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 525-44.

14. Woods, A.G., Sokolowska, I., Deinhardt, K., Darie, C.C. (2014). Investigating a novel protein using mass spectrometry: the example of Tumor Differentiation Factor (TDF). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 509-23.

13. Branza-Nichita, N., Petrareanu, C., Lazar, C., Sokolowska, I., Darie, C.C. (2014). Using proteomics to unravel the mysterious steps of the HBV life-cycle. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 453-81.

12. Sandu, C., Ngounou Wetie, A.G., Darie, C.C., Steller, H. (2014). Thiostrepton, a natural compound that triggers heat shock response and apoptosis in human cancer cells: a proteomics investigation. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 443-51.

11. Patel, S., Ngounou Wetie, A.G., Darie, C.C., Clarkson, B.D. Cancer Secretomes and their Place in Supplementing other Hallmarks of Cancer (2014). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 409-42.

10. Schneider, S.S., Aslebagh, R., Ngounou Wetie, A.G., Sturgeon, S.R., Darie, C.C., Arcaro, K.F. (2014). Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 399-408.

9. Andrei, V., Ngounou Wetie, A.G., Mihai, I., Darie, C.C., Vasilescu, A. (2014). Detection of biomedically relevant stilbenes from wines by mass spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 361-82.

8. Baral, R., Ngounou Wetie, A.G., Darie, C.C., Wallace, K. (2014). Mass Spectrometry for Proteomics-based Investigation using the Zebrafish vertebrate model system. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 331-40.

7. Ngounou Wetie, A.G., Woods, A.G., Darie, C.C. (2014). Mass spectrometric analysis of Post-translational modifications (PTMs) and protein-protein interactions (PPIs). Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 205-35.

6. Roy, U., Woods, A.G., Sokolowska, I., Darie, C.C. (2014). Utility of Computational Structural Biology in Mass Spectrometry. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 107-28.

5. Woods, A.G., Sokolowska, I., Ngounou Wetie, A.G., Wormwood, K., Aslebagh, R., Patel, S. Darie, C.C. (2014). Mass Spectrometry for Proteomics-based Investigation. Advancements of Mass Spectrometry in Biomedical Research, Eds. Alisa G. Woods & Costel C. Darie, Advances in Experimental Medicine and Biology Series (ISSN: 0065-2598), Springer International Publishing Switzerland, 806: 1-32.

4. Sokolowska, I., Woods, A.G., *Wagner, J., *Dorler, J., *Wormwood, K.L., Thome, J., Darie, C.C. (2012). Mass spectrometry for proteomics-based investigation of oxidative stress and heat shock proteins. ACS Book Series. Oxidative Stress: Diagnostics and Therapy. Editors: E. Silvana Andreescu & Maria Hepel; 1083 (12), 341-367. 

3. Woods, A.G., Sokolowska, I., *Yakubu, R., *Butkiewicz, M., *LaFleur, M., *Talbot, C., Darie, C.C. (2012). Blue Native PAGE and mass spectrometry as an approach for the investigation of stable and transient protein-protein interactions. ACS Book Series. Oxidative Stress: Diagnostics and Therapy. Editors: E. Silvana Andreescu & Maria Hepel; 1083 (13), 369-411.

2. Darie, C.C., Shetty, V., Spellman, D.S., Zhang, G., Xu, C., Cardasis, H.L., Blais, S., Fenyo, D., Neubert, T.A. (2008). Blue Native PAGE and mass spectrometry analysis of the ephrin stimulation-dependent protein-protein interactions in NG108-EphB2 cells. Applications of Mass Spectrometry in Life Safety. NATO Science for Peace and Security Series. Springer-Verlag, Düsseldorf, Germany, pp 3-22.

1. Darie, C.C., Litscher, E. S., Wassarman, P. M. (2008). Structure, processing, and polymerization of rainbow trout egg vitelline envelope proteins. Applications of Mass Spectrometry in Life Safety. NATO Science for Peace and Security Series. Springer-Verlag, Düsseldorf, Germany, pp 23-36.

(* represents undergraduate students)

35. Strong II, J.*, Whitham, D., Mutsengi, P.*, Pentecost B.T., Darie, C.C. A proteomic investigation of human serum from donors with triple-negative breast cancer and matched controls to identify protein biomarker for breast cancer detection. PROTEIN SCIENCE 2023 32 (12).

34. Whitham D., Mutsengi P.*, Pentecost B.T., Darie C.C. An in-gel proteomic investigation of human serum from donors with stage IIB breast cancer and matched controls to identify protein biomarkers for earlier breast cancer detection. PROTEIN SCIENCE 2023 32 (12).

33. Bruno, P, Pentecost B.T., Darie C.C. Proteomic analysis and comparison of Stage IIA T1N1 ER/PR negative Breast cancer serum to Controls for identification of potential Biomarkers for Breast cancer. PROTEIN SCIENCE 2023 32 (12).

32. Jayaweera, T.; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in gel digestion based Proteomics. PROTEIN SCIENCE 2023 32 (12).

31. Weraduwage K.*; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in-solution digestion-based Proteomics. PROTEIN SCIENCE 2023 32 (12).

30. Jayathirtha, M., Channaveerappa, D., Darie, C.C., Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) Protein using Mass Spectrometry based Proteomics. Faseb J 2021, 35.

29. Babii, C., Birsa, L. M., Gostin, I., Dupree, E., Darie, C. C., Mihasan, M., Stefan, M., Br-Cl flav - a novel synthetic flavonoid with potent antibacterial properties. Febs Open Bio 2019, 9, 116-117.

28. Mihasan, M., Babii, C., Channaveerappa, D., Aslebagh, R., Dupree, E., Darie, C. C., Time-dependent analysis of Paenarthrobacter nicotinovorans pAO1 nicotine-related proteome. Febs Open Bio 2019, 9, 404-404.

27. Mihasan, M., Babii, C., Channaveerappa, D., Aslebagh, R., Dupree, E., Darie, C., Proteomic analysis of nicotine response in Paenarthrobacter nicotinovorans pAO1. Febs Open Bio 2018, 8, 461-461.

26. Darie, C. C., Channaveerappa, D., Wormwood, K. L., Lux, J., Panama, B., Mass Spectrometry based Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria. Faseb J 2018, 32.

25. Channaveerappa, D., *Lux, J., McLerie, M., Panama, B., Darie, C., Mass Spectrometry Based Proteomics to Investigate the Molecular Changes in Rat Atria During Obstructive Sleep Apnea. Protein Sci 2018, 27, 191-191.

24. Dumbraveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B. K., Darie, C. C., Mass Spectrometry Based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. Protein Sci 2018, 27, 245-245.

23. Channaveerappa, D., Darie, C. C., *Lux, J., Wormwood, K. L., McLerie, M., Panama, B. K., Mass Spectrometry based Proteomic Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria. Protein Sci 2017, 26, 173-173.

22. Aslebagh, R., Channaveerappa, D., Arcaro, K. F., Darie, C. C., Mass Spectrometry-based Proteomics of Human Breast Milk to Identify Potential Breast Cancer Biomarkers. Molecular & Cellular Proteomics 2017, 16, S21-S21.

21. Dupree, E., Darie, C., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Assessment of the effects of pollutants in the Great Lakes on the human proteome. Protein Sci 2017, 26, 172-172.

20. Mihasan, M., Darie, C., Babii, C., Aslebagh, R., Nicotine-Induced Proteome of Arthrobacter nicotinovorans pAO1. Protein Sci 2017, 26, 173-174.

19. Dupree, E., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Darie, C., Assessment of the effects of pollutants in the Great Lakes on the human proteome. Faseb J 2017, 31.

18. Mihasan, M., Babii, C., Darie, C. C., Nicotine-Induced Proteome of Arthrobacter nicotinovorans pAO1+. Faseb J 2017, 31.

17. Channaveerappa, D., *Lux, J., Wormwood, K. L., McLerie, M., Panama, B. K., Darie, C. C., Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry based Proteomics. Faseb J 2017, 31.

16. Aslebagh, R., Arcaro, K. F., Darie, C. C., Proteomics Analysis of Human Breast Milk to Assess Breast Cancer Risk. Faseb J 2017, 31.

15. Wormwood, K. L., Charette, L., Ryan, J. P., Woods, A. G., Darie, C. C., Mass Spectrometry-Based Salivary Protein Biomarker Discovery in Autism Spectrum Disorder (ASD). Faseb J 2017, 31.

14. Aslebagh, R., Channaveerappa, D., Arcaro, K. F., Darie, C. C., Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk. Faseb J 2016, 30.

13. Channaveerappa, D., Li, K. N., Darie, C. C., Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines. Faseb J 2016, 30.

12. Wormwood, K. L., Charette, L., Ryan, J. P., Woods, A. G., Darie, C. C., Mass Spectrometry Based Proteomic Analysis of Saliva from Children with Autism Spectrum Disorder (ASD) and Matched Controls. Faseb J 2016, 30.

11. Sokolowska, I., Wetie, A. G. N., Woods, A. G., Darie, C. C., Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Protein Sci 2016, 25, 145-146.

10. Aslebagh, R., Ngounou, A., Channaveerappa, D., Arcaro, K., Darie, C., Proteomics Study of Human Breast Milk for Breast Cancer Biomarkers Discovery. Faseb J 2015, 29.

9 . Channaveerappa, D., Wetie, A. N., Lupu, L., Robu, A., Zamfir, A., Darie, C., Investigation of Tumor Differentiation Factor (TDF)-induced Cell Differentiation using Mass Spectrometry. Faseb J 2015, 29.

8. Wormwood, K., Wetie, A. N., Sokolowska, I., Beglinger, K., Ryan, J., Woods, A., Darie, C., Proteomic Analysis of Sera and Saliva from Children with Autism Spectrum Disorder (ASD) and Matched Controls. Faseb J 2015, 29.

7. Wormwood, K., Wetie, A. N., Charette, L., Ryan, J., Dupree, E., Woods, A., Darie, C., Mass spectrometry-based protein biomarker discovery in neurodevelopmental disorders. Protein Sci 2015, 24, 244-245.

6. Channaveerappa, D., Aslebagh, R., Arcaro, K. F., Darie, C. C., Mass spectrometry based proteomics to identify the protein differences in human breast milk from breast cancer patients and controls. Protein Sci 2015, 24, 233-234.

5. Sokolowska, I., Dorobantu, C., Woods, A. G., Macovei, A., Branza-Nichita, N., Darie, C. C., Proteomic analysis of plasma membranes isolated from undifferentiated and differentiated HepaRG cells. Proteome Sci 2012, 10.

4. Petrareanu, C., Macovei, A. M., Radu, G. L., Lazar, C., Darie, C., Branza-Nichita, N., Proteomic investigation of plasma membrane proteins involved in HBV infection. Febs J 2012, 279, 314-314.

3. Darie, C., Ionescu, A., Holland, J., Platica, O., Platica, M., Pituitary tumor differentiation factor, a potential therapeutic agent for breast and prostate cancers. Cancer Res 2009, 69.

2. Williams, Z., Litscher, E. S., Darie, C. C., Wassarman, P. M., Rational design of a pregnancy vaccine. Obstet Gynecol 2006, 107, 14s-15s.

1. Darie C., Drepper F., Mutschler B., Mauch S., Hoerth P., Biniossek M., Haehnel W. (2001). Studies of cyclic electron transport in bundle sheath chloroplasts and isolation of the NDH complex from chloroplasts of Zea mays. Proceedings of the 13th Congress of Photosynthesis, CSIRO, Australia, S14-002.

(* represents undergraduate students)

69. Darie, C.C. Application of mass spectrometry in biomedical research (invited speaker). Smart Diaspora-Workshop Proteins and analysis, April 2023, Timisoara, Romania.

68. Darie, C.C. Application of mass spectrometry in biomedical research (invited speaker). Smart Diaspora-Workshop Lasers and analysis, April 2023, Timisoara, Romania.

67. Darie, C.C. Mass spectrometry as a tool in biomedical research (invited speaker). STOP Cancer Conference, April 2023, Bucharest, Romania. Dr. Darie was also on the Romanian national TV. https://youtu.be/JfHxYZS9UMc

66. Darie, C.C. Food and Biomedical Applications of Mass Spectrometry (invited speaker). EUROALIMENT, 11 the International Symposium, October 20, 2023 Galati, Romania (online event)

65. Darie, C.C. Application of mass spectrometry in life sciences. Scientific Session of the Faculty of Biology, Tendences in biology: from molecules to complex systems, Alexandru Ioan Cuza University of Iasi, Romania. Virtual Format, October 2021. Iasi, Romania.

64. Darie, C.C., Dupree, E. J., Jayathirtha, M., Yorkey, H. *, Mihasan, M., Petre, B.A.  Proteomics: The Good, the Bad, and the Future of this Field. Eastern Analytical Symposium and Exhibition (virtual). November, 2020, Princeton, NJ.

63. Darie, C.C. Introduction to mass spectrometry and proteomics. 3rd International School “PROTEOMICS – from Introduction to Clinical Applications”, Alexandru Ioan Cuza University, July 2019, Iasi, Romania.

62. Darie C.C. & Channaveerappa, D. Proteomics in Rats with Obstructive Sleep Apnea and matched controls, Eastern Analytical Symposium, November 2018, Princeton, NJ.

61. Darie, C.C. Introduction to mass spectrometry and proteomics. 2nd International School “PROTEOMICS – from Introduction to Clinical Applications”, Alexandru Ioan Cuza University, July 2018, Iasi, Romania.

60. Darie, C.C., Channaveerappa, D.  Proteomics in Obstructive Sleep Apnea. 2nd International School “PROTEOMICS – from Introduction to Clinical Applications”, Alexandru Ioan Cuza University, July 2018, Iasi, Romania.

59. Darie, C.C. Applications of Mass Spectrometry in Biomarker Discovery and Protein Characterization, Department of Biochemistry, University of Medicine & Pharmacy, June 18, 2018, Iasi, Romania.

58. Darie, C.C. Applications of Mass Spectrometry in Protein Characterization, Petru Poni Institute of Macromolecular Chemistry of Chemistry, Romanian Academy of Sciences, June 19, 2018, Iasi, Romania.

57. Darie, C.C. Applications of Mass Spectrometry in Protein Characterization, Ion Ionescu de la Brad University of Veterinary Medicine, June 20, 2018, Iasi, Romania.

56. Darie, C.C. Applications of Mass Spectrometry in Biomarker Discovery and Protein Characterization, Department of Biology, Al. I. Cuza University, June 21, 2018, Iasi, Romania.

55. Darie, C.C., Applications of mass spectrometry in biomedical research, International Conference of the Romanian Society for Biochemistry & Molecular Biology, 8 – 9 June 2017, Timișoara, Romania.

54. Darie, C.C. & Aslebagh, R. Building a Protein Biomarker Signature for Early Detection of Breast Cancer Using Discovery Proteomics, Eastern Analytical Symposium and Exposition, November 13-16, 2016, Somerset, NJ.

53. Darie, C.C. Applications of Mass Spectrometry in Biomedicine. Department of Biology, Al. I. Cuza University, November 11, 2016, Iasi, Romania. 

52. Darie, C.C. Mass spectrometry-based proteomics for biomarker discovery: focus on Breast Cancer and Autism Spectrum Disorder. National Institute of Research for Electrochemistry and Condensed Matter, November 8, 2016, Timisoara, Romania. 

51. Darie, C.C., Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Eastern Analytical Symposium and Exposition, November 2015, Somerset, NJ.

50. Darie, C.C.. Use of Mass Spectrometry for Protein Characterization and Biomarker Discovery, Department of Chemistry & Biochemistry, Old Dominion University, November, 2015, Norfolk, VA.

49.  Darie, C.C., Sokolowska, I., Mathur, S., Butkiewicz*, M., Yakubu*, R., Talbot*, C., Samson*, J., Gawinowicz, M.A., Woods, A.G. New proteomics approaches for identification, quantitation and validation of new serum biomarkers, National Institute of Environmental Health Sciences, August 2010, Research Triangle Park, NC, USA.

48.  Darie, C.C., Mathur, S., Sokolowska, I., Butkiewicz*, M., Yakubu*, R., Talbot*, C., Samson*, J., Woods, A.G. New proteomics approaches for identification of new serum biomarkers. Diaspora, Workshop 8: Trends in Biomedical Genomics & Proteomics, September 22-24, 2010, Bucharest, Romania.

47.  Darie, C.C., Mathur, S., Sokolowska, I., Butkiewicz*, M., Yakubu*, R., Talbot*, C., Samson*, J., Woods, A.G. Investigation of molecular mechanisms of Tumor Differentiation Factor-induced cell differentiation. Diaspora, Workshop 20: Emerging challenges in agriculture and food - the management approach, September 22-24, 2010, Bucharest, Romania.

46.  Darie, C.C., Mathur, S., Sokolowska, I., Butkiewicz*, M., Yakubu*, R., Talbot*, C., Samson*, J., Woods, A.G.. Analysis of transient protein-protein interactions within EphB2-dependent signaling. Annual International Conference of the RSBMB, Romanian Journal of Biochemistry, 47, Suppl., 25 (2010), September 23-25, 2010, Bucharest, Romania.

45. Darie C.C., Neubert, T.A. (2007). Analysis of the EphB2 signal transduction pathway upon ephrinB1-Fc stimulation. 1st International Conference on Applications of Mass Spectrometry in Life Safety (NATO sponsored event), Herculane, Romania.

44. Darie C., Sujak A., Haehnel W. (2002). Four dimensional isolation of the Ndh complex from maize thylakoids, Cambridge University, Cambridge, UK.

43. Darie C.., Mutschler B., Biniossek M., Winter V., Haehnel W. (2002). Studies of the NAD(P)H: Plastoquinone oxidoreductase (Ndh Complex) from maize chloroplasts, The Annual German Botanical Congress, Freiburg, Germany.

42. Darie C. Haehnel W. (2001). Recombinant DNA technology, language and brain; language affinity, neuronal and genetic bases, Feldberg, BW, Germany 8. Darie C., Mutschler B., Haehnel W. (2001). Studies of the NAD(P)H: Plastoquinone oxidoreductase, Transient protein-protein complexes, Aarchus, Denmark.

41. Darie C.C., Channaveerappa, D. Dupree, E. J., Jayathirtha, M.  Applications of mass spectrometry in protein characterization and biomarker discovery.  ACS Northeast Regional Meeting (NERM), June 2019, Saratoga, NY.

40. Darie, C.C. Applications of Mass Spectrometry in Pharmaceutical and Biotechnology Industry. The 2018 31st CAMP meeting, May 18-20, 2018, Canandaigua, NY.  

39. Darie, C.C. Mass spectrometry-based proteomics for biomarker discovery in Autism Spectrum Disorder. Department of Chemistry, SUNY Buffalo. September 16, 2016, Buffalo, NY.  

38. Darie, C.C. & Channaveerappa D. Applications of Mass Spectrometry in Biomedical Research. The 2016 CAMP meeting, May 18-20, 2016, Canandaigua, NY.  

37.  Darie, C.C., Mass spectrometry for protein characterization and biomarker discovery. University of Connecticut, Department of Chemistry, Host Dr. J. Rusling, April 2014, Storrs, CT.

36. Darie, C.C. (2012). Tumor Differentiation Factor as a theragnostic agent for breast & prostate cancer. Department of Chemistry, SUNY Plattsburgh, Host: Dr. Linda A. Luck, February 10, Plattsburgh, NY.

35. Darie, C.C., Tumor Differentiation Factor and its potential biomedical applications, Sloan Kettering Institute, Molecular Pharmacology & Chemistry Program, November 2011, New York, NY.

(* represents undergraduate students)

34. Darie, C.C. Biomedical Applications of Mass Spectrometry (invited speaker). SOAR SUNY Potsdam, October 18, 2023 Potsdam, NY

33. Darie, C.C. Mass Spectrometry in Biomedical Research (invited speaker). Science Café, November 1, 2023 Potsdam, NY

32. Darie, C.C., Applications of Mass Spectrometry in Biomedical Research. Department of Chemistry and Biomolecular Science Freshman Seminar, Clarkson University, February 14, 2018, Potsdam, NY.

31. Darie, C.C., Mass spectrometry and its applications in protein analysis, State Unversity of New York, Department of Chemistry, Host Dr. Fadi Bou-Abdallah, April 2017, Potsdam, NY.

30. Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry and Biomolecular Science, Host Dr. M. Wriedt, February 2017, Potsdam, NY.

29. Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry and Biomolecular Science, Host Dr. E. Katz, February 2016, Potsdam, NY.

28.  Darie, C.C., Mass spectrometry for protein analysis, Trudeau Institute, January 2014, Saranac Lake, NY.

27.  Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry and Biomolecular Science, Host Dr. E. Katz, March 2015, Potsdam, NY.

26. Darie, C.C. Use of Mass Spectrometry for Protein Characterization and Biomarker Discovery, Department of Physics, Clarkson University Colloquium, December, 2014, Potsdam, NY.

25.   Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University, Department of Chemistry and Biomolecular Science, Host Dr. E. Katz, March 2014, Potsdam, NY.

24. Darie, C.C. Use of Mass Spectrometry for Protein Characterization and Biomarker Discovery. Department of Chemistry, SUNY Potsdam, November 2014, Potsdam, NY.

23.  Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University Department of Chemistry and Biomolecular Science, Host Dr. S. Minko, March 2013, Potsdam, NY.

22. Darie, C.C. (2012). New proteomics approaches for identification of new serum biomarkers, Clarkson University Chemistry, Department of Chemistry and Biomolecular Science, Host Dr. E. Katz, April 6, Potsdam, NY. 

21.  Darie, C.C., Mass spectrometry & proteomics, Host Dr. E.S. Andreescu, Clarkson University, Department of Chemistry and Biomolecular Science, March 2011, Potsdam, NY.

20.  Darie, C.C, Serum biomarkers in Neuroscience, Host Dr. A.G. Woods, Clarkson University, Neurobiology, Department of Biology, March 2011, Potsdam, NY.

19. Darie, C.C., New proteomics approaches for identification of new serum biomarkers, Clarkson University Department of Chemistry and Biomolecular Science, Host Dr. E. Katz, April 2011, Potsdam, NY.

18.  Darie, C.C., Mathur, S., Sokolowska, I., Butkiewicz*, M., Yakubu*, R., Talbot*, C., Samson*, J., Woods, A.G. Analysis of transient protein-protein interactions within EphB2-dependent signaling. 37th North East Regional Meeting of the ACS, Symposium "Oxidative stress: diagnosis and therapy", June 2-5, 2010, Potsdam, NY.

17.  Darie, C.C., Sokolowska, I., Mathur, S., Butkiewicz*, M., Yakubu*, R., Talbot*, C., Samson*, J., Gawinowicz, M.A., Woods, A.G. New proteomics approaches for identification, quantitation and validation of new serum biomarkers. 37th North East Regional Meeting of the ACS, Symposium "Detection of Protein Biomarkers for Medical Applications", June 2-5, 2010, Potsdam, NY.

16. Darie C.C., Platica M. Tumor Differentiation Factor as a potential differentiation agent in breast and prostate cancer. Department of Chemistry and Biomolecular Science, Clarkson University, January 21-23, 2009, Potsdam, NY.

15. Darie C.C., Platica M. Tumor Differentiation Factor as a potential differentiation agent in breast and prostate cancer. Department of Hematology/Oncology, Mount Sinai Medical Center (Martell Foundation), January 3-5, 2009, New York, NY.

14. Darie C.C., Neubert, T.A. (2008). Analysis of stable and transient protein-protein interactions by Blue Native PAGE and mass spectrometry. Skirball Institute, New York University, New York, NY, USA

13. Darie C.C., Neubert, T.A. (2007). Analysis of stable and transient protein-protein interactions by Blue Native PAGE and mass spectrometry. Skirball Institute, New York University, New York, NY, USA.

12. Darie C.C., Wassarman P. M. (2004). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Regeneron Pharmaceuticals, Tarrytown, NY, USA.

11. Darie C.C., Wassarman P. M. (2006).Investigation of the assembly and disassembly of the fish egg vitelline envelope proteins. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, New York, NY, USA.

10. Darie C.C., Wassarman P. M. (2005). Purification and analysis of fish egg vitelline envelope proteins. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, New York, NY, USA.

9. Darie C.C., Wassarman P. M. (2004). Disulfide assignment in fish egg vitelline envelope proteins by mass spectrometry. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, New York, NY.

8. Darie C.C., Wassarman P. M. (2003). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Department of Molecular, Cell & Developmental Biology, Mount Sinai Medical Center, New York, NY.

7. Darie C. , Drepper F., Mutschler B., Haehnel W. (2001). Isolation and functional characterization of the plastidial NAD(P)H-dehydrogenase from Zea mays, SFB 388, Zellulaere Funktionen Dynamischer Proteinwechselwirkungen, Freiburg, Germany.

6. Darie C. Haehnel W. (2001). Chlororespiration and poising of cyclic electron transport; Plastoquinone as electron transporter between thylakoid NADH-Dehydrogenase and peroxidase, Graduiertenkolleg "Biochemistry of enzymes," Feldberg, BW, Germany.

5. Darie C. Haehnel W. (2001).Two dimensional gel electrophoresis and mass spectrometry for proteome analysis, Department of Biochemistry, University of Freiburg, Freiburg, Germany.

4. Darie C. Haehnel W. (2001). Isolation of the Ndh complex from chloroplasts from Zea mays, 18th Photosynthesis congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Faculty of Biology, University Konstanz, Konstanz, Germany.

3. Darie C., Haehnel W. (2000). Plastidial NAD(P)H-dehydrogenase, Graduiertenkolleg "Biochemistry of enzymes," Institute of Physical Chemistry, Freiburg, Germany.

2. Darie C., Haehel W. (2000). Plastidial Ndh complex, 17th Photosynthesis Congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Institute for Physical Chemistry, Freiburg, Germany.

1. Darie C. (1999). Isolation, cloning and expression as fusion proteins of the ndh genes of the Ndh complex (NAD(P)H:plastoquinone-oxidoreductase) from mesophyll cloroplasts from Zea mays, Department of Biology, Al.I. Cuza University, Iasi, Romania.

(* represents undergraduate students)

88. Whitham D.; Haaker N,; Lowe, J.; Pentecost, B.T.; Darie, C.C. A proteomic investigation of human serum from donors with stage IIB breast cancer and matched controls to identify protein biomarkers for earlier breast cancer detection. Eastern Analytical Symposium, November, 2023, Princeton, NJ.

87. Whitham D.; Darie, C.C.; Petre, B.A. Optimization of the in-gel sample preparation for mass spectrometry-based proteomics. Eastern Analytical Symposium, November, 2023, Princeton, NJ.

86. Jayaweera, T.; Jayathirtha, M.; Whitham, D..; Darie, C.C. Investigation of the Effects of Human Jumping Translocation Breakpoint (hJTB) Protein Using Mass Spectrometry Based Proteomics. 62nd Eastern Analytical Symposium and Exposition, November, 2023, Princeton, NJ.

85. Bruno P.; Pentecost, B.T.; Darie, C.C. Proteomic analysis and comparison of stage IIA T1N1 ER/PR negative breast cancer serum to controls for identification of potential biomarkers for breast cancer. 62nd Eastern Analytical Symposium and Exposition, November, 2023, Princeton, NJ.

84. Arshad A.; Whitham, D.; Pentecost, B.T.; Arcaro, K.F.; Darie, C.C. Proteomics Analysis of Breast Milk for Early Detection of Breast Cancer: A Mass Spectrometry Approach. 62nd Eastern Analytical Symposium and Exposition, November, 2023, Princeton, NJ.

83. Morrissiey H.*; Mutsengi P.; Whitham D.; Pentecost B.T.; Darie C.C. A case study investigation for biomarker discovery: proteomics analysis of sera from an Asian American woman with triple negative breast cancer and matched controls. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

82. Seymour L.*; Mutsengi P.; Whitham D.; Pentecost B.T.; Darie C.C. A proteomics investigation of human sera from African American donors with invasive ductal carcinoma breast cancer and matched controls. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

81. Haaker N.*; Whitham D.; Pentecost B.T.; Darie C.C. A proteomic investigation of human serum from donors with triple negative breast cancer and matched controls to identify potential protein biomarkers for breast cancer detection. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

80. Whitham D.; Haaker N,; Lowe, J.; Pentecost, B.T.; Darie, C.C. A mass spectrometry-based investigation of human serum from donors with stage IIB breast cancer and matched controls to identify protein biomarkers for earlier breast cancer detection. Al I Cuza University Days, October 27, 2023 Iasi, Romania (virtual)

79. Whitham, D.; Mutsengi, P.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. A proteomic investigation of human serum from donors with breast cancer and matched controls of identify protein biomarkers for earlier breast cancer detection. Smart Diaspora, April 2023, Timisoara, Romania.

78. Wait J., Wyatt B.C., Whitham, D.; Darie, C.C., Anason, B., Colak A. A Nanoscale AFM Tribological Investigation of the Ti 3 C 2 T x MXene and a Structural Analysis of Snake Skin. Smart Diaspora, April 2023, Timisoara, Romania.

77. Whitham, D.; Aslebagh, R.; Channaveerappa, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. Proteomic analysis of human breast milk using mass spectrometry to reveal potential protein biomarkers for early breast cancer detection. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

76. Whitham, D.; *Mutsengi, P.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. A proteomics investigation of human serum from donors with triple negative breast cancer and matched controls to identify protein biomarkers for breast cancer detection. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

75. *Jayaweera, T.; Jayathirtha, M.; Whitham, D.; Channaveerappa, D.; Darie, C.C. Investigation of the effects of human jumping translocation breakpoint (hJTB) protein using mass spectrometry based proteomics. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ

74. *Mutsengi, P.; Whitham, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. A proteomics investigation of human sera from African American donors with invasive ductal carcinoma breast cancer and matched controls. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

73. *Sullivan, I.; *Mutsengi, P.; Whitham, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. Proteomics analysis of sera from an Asian American woman with triple negative breast cancer and a matched control: a case study investigation for biomarker discovery. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

72. *Donnelly, M.; *Yorkey, H.; Whitham, D.; Darie, C.C. Optimization of the in-gel trypsin digestion for mass spectrometry- based proteomics. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

71. Jayathirtha, M.,Whitham, D., Channaveerappa, D., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics. 60thEastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

70. Petre, B.A. “Mass spectrometric characterization of the zein protein composition in maize flour„eco- friendly” extracts”. Scientific Session of the Faculty of Biology, Tendences in biology: from molecules to complex systems, Alexandru Ioan Cuza University of Iasi, Romania. Virtual Format, October 2021. Iasi, Romania.

69. Jayathirtha, M.,Whitham, D., Channaveerappa, D., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics. Scientific Session of the Faculty of Biology, Tendences in biology: from molecules to complex systems, Alexandru Ioan Cuza University of Iasi, Romania. Virtual Format, October 2021. Iasi, Romania.

68. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K. F., Darie, C. C.  Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. Scientific Session of the Faculty of Biology, Alexandru Ioan Cuza University of Iasi, Romania. Virtual Format, October 2021.

67. Jayathirtha, M.,Whitham, D., Channaveerappa, D., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

66. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K. F., Darie, C. C.  Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

65. *Yorkey, H.; Whitham, D.; Darie, C. C. Optimization of the in-gel trypsin digestion for proteomics applications. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

64. *Mustengi, P., Whitham, D., Egwang, T., Owalla, T. J., Darie, C.C. Proteomics investigation of Ugandan mothers for the presence of Plasmodium and viral proteins in breast milk. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

63. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines. Eastern Analytical Symposium and Exhibition (virtual). November, 2020, Princeton, NJ.

62. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Meiman, J., Darie, C.C. The Effect of Legacy PBT Chemicals in the Great Lakes Region on the Fish Consumer Proteome. Eastern Analytical Symposium and Exhibition (virtual). November, 2020, Princeton, NJ.

61. *Manzoor, Z., Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Meiman, J., Darie, C.C. Analysis of the Lake Trout Proteome Using Evolutionary Proteomics. Eastern Analytical Symposium and Exhibition (virtual). November, 2020, Princeton, NJ.

60. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K.,  Darie, C.C. Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. Eastern Analytical Symposium and Exhibition (virtual). November, 2020, Princeton, NJ.

59. Mihăşan M, Babii C, Aslebagh R, Channaveerappa D, Dupree EJ, Darie CC. Proteomic Analysis of Nicotine Metabolism in Paenarthrobacter Nicotinovorans. Eastern Analytical Symposium and Exhibition (virtual). November, 2020, Princeton, NJ. 

58. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond, Meiman, J., Darie, C.C.  Effects of Legacy Contaminants on the Great Lakes Ecosystem: A Proteomic Approach. River Institute: Science + Nature Untapped (virtual). May 6th, 2020, Cornwall, ON, Canada.

57. Channaveerappa, D., *Lux, J.C., Panama, B.K., Darie C.C. Mass Spectrometry-Based Proteomics Investigation of Molecular Changes in Rats during Induced Obstructive Sleep Apnea. Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

56. Dupree, E. J., Crimmins, B., Holsen., T.M., Darie C.C. Analysis of the Lake Trout (Salvelinus Namaycush) Through Evolutionary Proteomics. Eastern Analytical Symposium and exhibition. November, 2019, Princeton, NJ.

55. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) Protein using Mass Spectrometry based Proteomics. Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

54. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Meiman, J., Darie, C.C.  Effects to the Human Proteome due to Legacy Chemical Exposure in the Great Lakes. Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

53. *Stradtman, S., Channaveerappa, D., Panama, B.K., Darie C.C. Mass Spectrometry Based Proteomic Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria.  Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

52. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J,. Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). Eastern Analytical Symposium and Exhibition. November, 2018. Princeton, NJ.

51. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond,  Darie, C.C.  Proteomic analysis of lake trout (Salvelinus namaycush). 2nd International School “PROTEOMICS – from Introduction to Clinical Applications”, University Alexandru Ioan Cuza, July 2018, Iasi, Romania.

50. Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize Human Jumping Translocation Breakpoint (hJTB) Protein, Eastern Analytical Symposium and Exposition November 13-16, 2016, Somerset, NJ.

49. Wormwood, K.L. Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Protein Biomarker Discovery in Autism Spectrum Disorder (ASD), Eastern Analytical Symposium and Exposition. November 13-16, 2016. Somerset, NJ. 

48. Darie, C.C. Mass Spectrometry-Based Proteomics of Oxidative Stress: Identification of 4-hydroxy-2-nonenal (HNE) Adducts of Amino Acids Using Lysozyme and Bovine Serum Albumin as Model Proteins,  Eastern Analytical Symposium and Exposition, November 13-16, 2016, Somerset, NJ.

47. Wormwood, K.L.& Darie, C.C., MS based Protein Biomarkers” Chromatography Forum of Delaware Valley’s Spring Symposium.  April 14, 2016.  Wilmington, DE.

46. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C.. Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. Eastern Analytical Symposium and Exposition, November 16-18, 2015, Somerset, NJ.

45. Channaveerappa D., Aslebagh R., Arcaro F. K., Darie C. C., Proteomics Study to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls Using Mass Spectrometry, 2015 Eastern Analytical Symposium and Exposition, November 2015, Somerset, NJ.

44.  Woods, A.G., Darie, C.C. Protein Biomarkers in Autism Spectrum Disorders, The International Center for Autism Research and Education (ICare4Autism) Conference "Autism: Cutting Edge Research and Promising Treatment Approaches", Hotel Pennsylvania, June 2014, New York, NY.

43.  Woods, A.G., Darie, C.C. Protein Biomarkers in Autism Spectrum Disorders, The International Center for Autism Research and Education (ICare4Autism) Conference "Autism: Cutting Edge Research and Promising Treatment Approaches" (international meeting), Albert Einstein College of Medicine in conjunction with Montefiore Medical Center, June 2013, New York, NY.

(* represents undergraduate students)

42. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond, Meiman, J., Darie, C.C.  Effects to the human proteome due to legacy chemical exposure in the Great Lakes.  ACS Northeast Regional Meeting (NERM), June 2019, Saratoga, NY.

41. Aslebagh R., Fliesler S. J., Pfeffer B. A., Darie C. C., Mass spectrometric identification of amino acids modified by 4-hydroxy-2-nonenal (HNE) as a model for proteome-scale analysis of oxidative stress. American Chemical Society Northeastern Regional (ACS NERM) Meeting, June 2015, Ithaca, NY.

40. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C.. Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. 2015 American Chemical Society Northeastern Regional (ACS NERM) Meeting, June 2015, Ithaca, NY.

39. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C.. Proteomics Study to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls Using Mass Spectrometry. American Chemical Society Northeastern Regional (ACS NERM) Meeting, June 2015, Ithaca, NY.

38. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, k.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk. 33nd Annual Chemistry Graduate Student Symposium, University at Buffalo, the State University of New York, May 2015, Buffalo, NY.

37. Ngounou Wetie, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Chemistry Graduate Student Symposium at the University at Buffalo, May 2014, Buffalo, NY. 

36.  Ngounou Wetie, A.G., Darie, C.C. Investigation of the mechanism of action of the Tumor Differentiation Factor, Department of Chemistry Seminar, SUNY Plattsburgh, March 2014, Plattsburgh, NY.

(* represents undergraduate students)

35. Petre, B.A. Fluorimetric & mass spectrometric assays for lysosomal storage disorders diagnostic in newborns. Department of Chemistry Seminar Series, SUNY Potsdam, October, 2021, Potsdam, NY.

34. Petre, B.A. Mass spectrometry in today&’s and tomorrow’s life science research” at the Arts & Sciences Seminar Series, Fall 2021 David A.Walsh’67 Arts & Sciences Seminar Series, Clarkson University, October, 2021, Potsdam, NY.

33. Petre, B.A. Mass spectrometry based approach for Lysosomal storage diseases diagnostic in newborns Department of Chemistry & Biomolecular Science Seminar, Thesis Defense. Clarkson University, September, 2021, Potsdam, NY. 

32. Dupree, E. J. Mass Spectrometry-based Proteomic Investigation of the Effect of Persistent, Bioaccumulative and Toxic Chemicals on the Great Lakes Ecosystem. Department of Chemistry & Biomolecular Science Seminar, Thesis Defense. Clarkson University, December, 2020, Potsdam, NY. 

31. Dupree, E. J. My Clarkson Experience. Ronald E. McNair Post-baccalaureate Achievement Program Luncheon. June 11, 2019. Clarkson University, Potsdam, NY.

30. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines. Department of Chemistry and Biomolecular Science Seminar, March 2019, Clarkson University, Potsdam, NY. 

29. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond,  Darie, C.C.  Effect of Legacy Chemicals on the Great Lakes Ecosystem: A Proteomic approach. Department of Chemistry and Biomolecular Science Seminar, Clarkson University, February 2018, Potsdam, NY.

28. Dupree, E.J., My Experiences and Research at Clarkson University. Department of Chemistry and Biomolecular Science Freshman Seminar, Clarkson University, March 14, 2018, Potsdam, NY.

27. Channaveerappa, D., * Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C.  Identification of a protein signature for Obstructive Sleep Apnea (OSA), Clarkson University Department of Chemistry & Biomolecular Science Seminar, December 2017, Potsdam, NY.

26. Mihasan, M., Arthrobacter nicotinovorans pAO1- Why do we need its proteome? State Unversity of New York Potsdam, Department of Biology, Host Dr. Robert Ewy, May 3 2017, Potsdam, NY.

25. Mihasan, M., Arthrobacter nicotinovorans pAO1 - a tool for sustainable production of value-added chemicals, Biology, Clarkson University, Department of Biology, Host Dr. Kenneth Wallace, April 21, 2017, Potsdam, NY.

24. Mihasan, M., Arthrobacter nicotinovorans pAO1as a tool to produce neuroactive compounds, Biology Dept., St Lawrence University, Host Dr. Babasola Fateye, April 18, 2017, Canton, NY 

23. Mihasan, M., Arthrobacter nicotinovorans pAO1 - Why do we need its proteome? Clarkson University, School of Arts & Sciences, Walsh Seminar Series, Host Dr. Costel C. Darie, April 2017, Potsdam, NY.

22. Mihasan, M., Arthrobacter nicotinovorans pAO1 - Why do we need its proteome? State Unversity of New York, Department of Chemistry, Host Dr. Fadi Bou-Abdallah, April 2017, Potsdam, NY.

21. Mihasan, M., Arthrobacter nicotinovorans pAO1 - Why do we need its proteome? Clarkson University, Department of Chemistry & Biomolecular Sciences, Host Dr. Costel C. Darie, March 2017, Potsdam, NY.

20. *Borland, M. & Darie, C.C., Proteomics-Based Biomarker Discovery for Autism Spectrum Disorder” 18th Annual Spring Symposium on Undergraduate Research Experiences. Clarkson University, April 16, 2016,  Potsdam, NY.

19. *Brisbin, A. & Darie, C.C., Identification of Proteins in the Annulus Fibrosus and Nucleus Pulposus of the Mature Bovine Intervertebral Disc, 18th Annual Spring Symposium on Undergraduate Research Experiences.  April 16, 2016.  Clarkson University, Potsdam, NY.

18. Patel, S., Darie, C.C., Clarkson, B.D. Collective Behavior in Acute Lymphoblastic Leukemia. Department of Chemistry & Biomolecular Science, Clarkson University, April 8, 2016, Potsdam, NY.

17. Channaveerappa D. & Darie C.C., Functional Investigation of Human Jumping Translocation Breakpoint (hJTB) Protein by Mass Spectrometry-based Proteomics. Department of Chemistry & Biomolecular Science, Clarkson University, March 11, 2016, Potsdam, NY.

16. Wormwood, K.L.& Darie, C.C.,, My Journey at Clarkson University Clarkson University , Clarkson University, Department of Chemistry & Biomolecular Science, Host Dr. E. Katz, February 2016, Potsdam, NY.

15. Patel, S., Darie, C.C., Clarkson, B.D. Identification of Differentially Secreted Proteins Involved in Defective Quorum Sensing in Ph+ Acute Lymphoblastic Leukemia (ALL) using SILAC. Department of Chemistry & Biomolecular Science, Clarkson University, November 2015, Potsdam, NY.

14. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. Department of Chemistry & Biomolecular Science Seminar, April 2015, Potsdam, NY.

13. Ngounou Wetie, A.G., Novel applications of mass spectrometry-based proteomics for biomarker discovery of autism spectrum disorder (ASD) and investigation of protein post-translational modifications (PTMs). Ph.D. thesis defense, Department of Chemistry and Biomolecular Science, April 2015, Potsdam, NY.

12. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, k.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk. Department of Chemistry and Biomolecular Science Seminar, February 2015, Clarkson University, Potsdam, NY.

11. Ngounou Wetie, A.G., The quest for a biomarker of autism spectrum disorder (ASD). Department of Chemistry and Biomolecular Science, January 2015, Potsdam, NY.

10. Ngounou Wetie, A.G., Darie, C.C. Functional investigation of the tumour differentiation factor (TDF) protein. Clarkson University, Department of Chemistry and Biomolecular Science, September 2013, Potsdam, NY.

9. Sokolowska, I., Darie, C.C. Investigation of Tumor Differentiation Factor (TDF) and its putative receptor (TDF-R), Clarkson University, Department of Chemistry and Biomolecular Science, Thesis defense, May 2013, Potsdam, NY.

8. Sokolowska, I. & Darie, C.C. Identification of Tumor Differentiation Factor Receptor, Department of Chemistry and Biomolecular Science Seminar, Clarkson University, January 2013, Potsdam, NY.

7. Sokolowska, I. & Darie, C.C. Identification of Tumor Differentiation Factor Receptor, Department of Chemistry and Biomolecular Science Seminar, Clarkson University, September 2011, Potsdam, NY.

6. *Yakubu, R., Sokolowska, I., Mathur, S., Darie, C.C. Biomarker Discovery through the use of Proteomics Tools, 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

5. *Butkiewicz, M., Woods, A. G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder". 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

4. Sokolowska, I., Darie, C.C., Investigation of Tumor Differentiation Factor and its receptor – potential serum biomarker and therapeutic target in breast and prostate cancer, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

3. *Yakubu, R., Sokolowska, I., Mathur, S., Darie, C.C., Biomarker Discovery through the use of Proteomics Tools, Honors Program, Clarkson University, April 2011, Potsdam, NY.

2.  Sokolowska, I., Mathur, S., Darie, C.C. New proteomics approaches for identification of new serum biomarkers. 37th North East Regional Meeting of the American Chemical Society, Symposium "Detection of Protein Biomarkers for Medical Applications", June 2-5, 2010, Potsdam, NY.

1. *Butkiewicz, M., Darie, C.C. Identification of serum biomarkers in autism spectrum disorders. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY.

(* represents undergraduate students, ** represents a highschool student)

258. Whitham D.; Bruno P.; Haaker N.; Pentecost B.T.; Arcaro K.F.; Darie, C.C. Human breast milk as a bio-fluid for the use of protein biomarkers for breast cancer. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

257. Jayaweera T.; Crimmins B.; Fernando S.; Holsen T.; Darie C.C. Monitoring the estrogen- inducible proteins in Lake trout (Salvelinus namaycush) from Great Lakes upon exposure to environmental contaminants. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

256. Strong J.*; Whitham D.; Sullivan, I.; Haaker N.; Pentecost B.T.; Darie C.C. A proteomic analysis of human serum from donors with triple negative breast cancer and matched controls to identify protein biomarkers for breast cancer detection. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

255. Hukovic, A.**; Whitham D.; Pentecost B.T.; Darie C.C. Proteomics Analysis of sera from a Hispanic woman with triple negative breast cancer and a matched control: A case study investigation for biomarker discovery. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

254. Darie C.A.**; Mutsengi P.; Whitham D.; Pentecost B.T.; Darie C.C. Proteomics analysis of sera from an Asian American woman with triple negative breast cancer and a matched control: a case study investigation for biomarker discovery. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

253. Weraduwage K.*; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in-solution digestion-based Proteomics. 62nd Eastern Analytical Symposium and Exposition, November 2023. Princeton, NJ.

252. Bruno P.; Pentecost, B.T.; Darie, C.C. Proteomic analysis and comparison of Stage IIA T1N1 ER/PR negative Breast cancer serum to Controls for identification of potential Biomarkers for Breast cancer. The 37 th Protein Society Symposium, July 2023, Boston, MA.

251. Jayaweera, T.; Jayathirtha, M.; Whitham, D..; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in gel digestion based Proteomics. The 37 th Protein Society Symposium, July 2023, Boston, MA.

250. Whitham D.; Haaker, N.; Lowe, J.; Pentecost, B.T.; Darie, C.C. An in-gel proteomic investigation of human serum from donors with stage IIB breast cancer and matched controls to identify proteins biomarkers for earlier breast cancer detection. The 37 th Protein Society Symposium, July 2023, Boston, MA.

249. Strong J*. Whitham D.; Mutsengi, P.; Pentecost, B.T.; Darie, C.C. A Proteomic Investigation of Human Serum from donors with triple-negative breast cancer and matched controls to identify Protein Biomarkers for Breast Cancer Detection. The 37 th Protein Society Symposium, July 2023, Boston, MA.

248. Weraduwage K.*; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in-solution digestion-based Proteomics. The 37 th Protein Society Symposium, July 2023, Boston, MA.

247. **Darie, C.A., Whitham, D., Wait, J., Woods, A.G., Colak, A., Darie, C.C. Structural Characterization of Snakes Skins: A Proteomics Investigation 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

246. *Jayaweera, T.; Jayathirtha, M.; Whitham, D.; Channaveerappa, D.; Darie, C.C. Mass spectrometry based proteomics to investigate and characterize the human jumping translocation breakpoint (hJTB) protein using cancer cell lines. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

245. *Haaker, N.; *Mutsengi, P.; Whitham, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. A proteomics investigation of human sera from African American donors with invasive ductal carcinoma breast cancer and matched controls. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

244. *Lowe, J.; Whitham, D.; Aslebagh, R.; Channaveerappa, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. Proteomic analysis of human breast milk using mass spectrometry to reveal potential protein biomarkers for early breast cancer detection. 61 st Eastern Analytical Symposium and Exposition, November 2022, Princeton, NJ.

243. Whitham, D.; *Mutsengi, P.; Aslebagh, R.; Channaveerappa, D.; Pentecost, B.; Arcaro, K. F.; Darie, C. C. Proteomic Analysis of Human Breast Milk and Serum to Reveal Potential Protein Biomarkers for Breast Cancer. 70 th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June 2022, Minneapolis, MN.

242. Jayathirtha, M.; Whitham, D.; Channaveerappa, D.; Darie, C.C. Mass spectrometry based proteomics to investigate and characterize the human jumping translocation breakpoint (hJTB) protein using cancer cell lines. 70 th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June 2022, Minneapolis, MN.

241. *Jayaweera, T.; Darie Ion, L.; Dimitriu, C.; Przyblyski, M.; Darie, C.C.; Petre, B.A. Enzymatic activities assay of lysosomal storage diseases by multiplex mass spectrometry. 70 th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June 2022, Minneapolis, MN.

240. *Alwine, S.; Dupree, E.J.; Crimmins, B.; Holsen, T.M.; Darie, C.C. Analysis of the lake trout heart and blood proteome using evolutionary proteomics. 70 th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June 2022, Minneapolis, MN.

239. Jayathirtha, M., Whitham, D., Channaveerappa, D., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Human Jumping Translocation Breakpoint (hJTB) Protein using Cancer Cell Lines, American Society for Biochemistry & Molecular Biology, April 2022, Philadelphia, PA.

238. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K., Darie, C.C. Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer, American Society for Biochemistry & Molecular Biology, April 2022, Philadelphia, PA.

237. *Jayaweera, T., Darie Ion, L., Petre, B.A., Darie, C.C. Multiplex Mass Spectrometry for Enzymatic Activities Screening of Lysosomal Storage Diseases, American Society for Biochemistry & Molecular Biology, April 2022, Philadelphia, PA.

236. *Alwine, S., Dupree, E., Crimmins, B., Holsen, T., Darie, C.C., Analysis of the lake trout heart, blood, liver, and brain proteome using evolutionary proteomics American Society for Biochemistry & Molecular Biology, April 2022, Philadelphia, PA.

235. *Donnelly, M., *Yorkey, H., Whitham, D., Darie, C. C. Optimization of the in-gel trypsin digestion for proteomics applications. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

234. *Alwine, S., Dupree, E. J., Crimmins, B., Holsen, T., Darie, C.C. Analysis of the lake trout heart and blood proteome using evolutionary proteomics. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

233. *Rai, Y., *Harrison S., *Dunckel, S., Darie, C.C. Culture and Identification of Airborne Bacteria using Mass Spectrometry at Clarkson University. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

232. *Underwood B., Ion, L., Dimitriu, C., Przybylski, M., Darie. C.C., Petre, B. A. Mass Spectrometric based approach for Lysosoman storage diseases diagnostic in newborns. 60th Eastern Analytical Symposium and Exposition, November 2021, Princeton, NJ.

231. *Alwine, S., Dupree, E. J., Crimmins, B., Holsen, T., Darie, C.C. Analysis of the lake trout heart and blood proteome using evolutionary proteomics. Scientific Session of the Faculty of Biology, Alexandru Ioan Cuza University of Iasi, Romania. October 2021. Virtual Conference.

230. *Donnelly, M., *Yorkey, H., Whitham, D., Darie, C. C. Optimization of the in-gel trypsin digestion for proteomics applications. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

229. Petre, B.A.Darie-Ion, L., Belei, D., Darie, C.C., Przybylski, M. Enzymatic Activities Assay of Lysosomal Storage Diseases by Multiplex Mass Spectrometry. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

228. *Donnelly, M., *Yorkey, H., Whitham, D., Darie, C. C. Optimization of the in-gel trypsin digestion for proteomics applications. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

227. *Mutsengi, P., Whitham, D., Egwang, T., Owalla, T. J., Darie, C.C. Proteomics investigation of Ugandan mothers for the presence of Plasmodium and viral proteins in breast milk. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

226. *Yorkey, H., Dupree, E. J., Crimmins, B., Holsen, T., Darie, C.C. Mass spectrometry-based analysis of the lake trout brain proteome. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

225. *Alwine, S., Dupree, E. J., Crimmins, B., Holsen, T., Darie, C.C. Analysis of the lake trout heart and blood proteome using evolutionary proteomics. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

224. *Rai, Y., *Harrison S., *Dunckel, S., Darie, C.C. Culture and Identification of Airborne Bacteria using Mass Spectrometry at Clarkson University. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

223. Jayathirtha, M.,Whitham, D., Channaveerappa, D., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

222. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K. F., Darie, C. C.  Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. 69th American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, Oct 2021, Philadelphia, PA.

221. Jayathirtha, M.,Whitham, D., Channaveerappa, D., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics. 35th Annual Symposium of the Protein Society July 2021. Virtual Conference.

220. Alwine, S., Dupree, E. J., Crimmins, B., Holsen, T., Darie, C.C. Analysis of the lake trout heart and blood proteome using evolutionary proteomics. 35th Annual Symposium of the Protein Society July 2021. Virtual Conference.

219. Yorkey, H.; Dupree, E. J.; Crimmins, B.; Holsen, T.; Darie, C.C. Mass spectrometry-based analysis of the lake trout brain proteome. The Protein Society 35th Annual Symposium. July 2021. Virtual Conference.

218. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K. F., Darie, C. C.  Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. The Protein Society 35th Annual Symposium. July 2021. Virtual Conference.

217. *Sechrist, Z., Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) Protein using Mass Spectrometry based Proteomics. Eastern Analytical Symposium and Exhibition. November, 2020, Princeton, NJ.

216. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics. 68th ASMS Conference on Mass Spectrometry and Allied Topics, June 2020, Online Reboot.

215. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond, Meiman, J., Darie, C.C.  Effects to the human proteome due to legacy chemical exposure in the Great Lakes.  68th ASMS Conference on Mass Spectrometry and Allied Topics, June 2020, Online Reboot.

214. *Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K. F., Darie, C. C.  Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. 68th ASMS Conference on Mass Spectrometry and Allied Topics, June 2020, Online Reboot.

213. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics. American Society for Mass Spectrometry Sanibel Conference: Exposomics: Unravelling the exposome, January 2020, Captiva, FL.

212. *Whitham, D.; Aslebagh, R.; Channaveerappa, D.; Pentecost, B.; Arcaro, K. F.; Darie, C. C. Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. American Society for Mass Spectrometry Sanibel Conference: Exposomics: Unravelling the Exposome, January 2020, Captiva, FL.

211. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond, Meiman, J., Darie, C.C.  Effects to the human proteome due to legacy chemical exposure in the Great Lakes.  American Society for Mass Spectrometry Sanibel Conference: Exposomics: Unravelling the exposome, January 2020, Captiva, FL.

210. *Alwine, S., Dupree, E. J., Crimmins, B., Holsen., T.M., Darie C.C. Proteomic analysis of the blood from lake trout (Salvelinus namaycush). Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

209. *Manzoor, Z., Dupree, E. J., Crimmins, B., Holsen., T.M., Darie C.C. Proteomic analysis of the heart tissue from lake trout (Salvelinus namaycush). Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

208. *Whitham, D., Jayathirtha, M., Channaveerappa, D., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein Using Cancer Cell Lines. Eastern Analytical Symposium and Exhibition. November, 2019, Princeton, NJ.

207. Mihasan, M., Babii, C., Channaveerappa, D., Aslebagh, D., Dupree, E., Darie, C.C. Time-dependent analysis of Paenarthrobacter nicotinovorans pAO1 nicotine-related proteome, 44th FEBS Congress, From Molecules to Living Systems, July 6‐11, 2019, poster USAP-39-007, Krakow, Poland.

206. Mihasan, M., Babii, C., Channaveerappa, D, Aslebagh, R, Dupree, E.J.,, Darie, C.C. Time- dependent analysis of Paenarthrobacter nicotinovorans pAO1 nicotine-related proteome, 67th ASMS Conference on Mass Spectrometry and Allied Topics, June 2019, Atlanta, GA.

205. Channaveerappa, D., *Lux, J.C.,   Jayathirtha, M.,  Dumbrăveanu, C.,  Panama, B.K., Darie C.C. Proteomic Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass spectrometry, 67th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June, 2019, Atlanta, GA.  

204. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) Protein using Mass Spectrometry based Proteomics.  67th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics, June 2019, Atlanta, GA.

203. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond, Meiman, J., Darie, C.C.  Effects to the human proteome due to legacy chemical exposure in the Great Lakes.  67th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics, June 2019, Atlanta, GA.

202. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 57th Eastern Analytical Symposium and Exposition, November 2018, Princeton, NJ.

201. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M., Meiman, J., Darie, C.C.  Effects of legacy chemical exposure in the Great lakes ecosystem on the human proteome. Eastern Analytical Symposium and Exhibition. Graduate Student Award Poster. November, 2018, Princeton, NJ.

200. Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Mass Spectrometry based Proteomics to Investigate the Molecular Changes in Rat Atria during Obstructive Sleep Apnea, Eastern Analytical Symposium and Exhibition. November, 2018, Princeton, NJ.

199. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 1st North American Mass Spectrometry Summer School, University of Wisconsin, August, 2018, Madison, WI.

198. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., *Lux, J., Panama, B., Darie, C.C.  Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. 1st Annual North American Mass Spectrometry Summer School, University of Wisconsin, August, 2018. Madison, WI.

197. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J,. Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). 1st Annual North American Mass Spectrometry Summer School, University of Wisconsin, August, 2018. Madison, WI.

196. Channaveerappa, D., *Lux, J.C., McLerie, M., Panama, B.K., Darie C.C. Mass Spectrometry based Proteomics to Investigate the Molecular Changes in Rat Atria during Obstructive Sleep Apnea, 1st Annual North American Mass Spectrometry Summer School, University of Wisconsin, August, 2018. Madison, WI.

195. Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry, 32nd Annual Symposium of The Protein Society, July 2018, Boston, MA.

194. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., *Lux, J., Panama, B., Darie, C.C.  Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. 32nd Annual Symposium of The Protein Society, July 2018, Boston, MA.

193. Mihasan, M., Babii, C., Aslebagh,  R., Channaveerappa D., Dupree, E., Darie C.C., Proteomic analysis of nicotine response in Paenarthrobacter nicotinovorans pAO1, The 43rd FEBS Congress, Biochemistry Forever,  July 7 - 12, 2018, Prague, Czech Republic.

192. Wormwood, K.L., Dupree, E.J., Woods, A.G., Abbeduto, L., Darie, C.C. Mass Spectrometry-based Salivary Proteomics Investigation of Fragile X Syndrome (FXS), 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 2-7, 2018. San Diego, CA.

191. Dupree, E.J., Crimmins, B., Holsen, T., Pagano, J., Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 2-7, 2018. San Diego, CA.

190. Aslebagh, R., Channaveerappa D., Arcaro K.F., Darie C.C., Mass Spectrometry-based Proteomics of Human Breast Milk by Two-Dimensional Polyacrylamide Gel Electrophoresis (2D-PAGE) to Assess Breast Cancer Risk. 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 2-7, 2018. San Diego, CA.

189. Channaveerappa, D., Mihasan, M., Babii, C., Aslebagh, R., Dupree, E.J., Darie C.C. Proteomics based analysis of the nicotine catabolism in Paenarthrobacter nicotinovorans pAO1. 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 2-7, 2018. San Diego, CA.

188. Jayathirtha, M., Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry, 66th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 2-7, 2018. San Diego, CA.

187. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J,. Darie, C.C.  Proteomic analysis of the lake trout (Salvelinus namaycush). 31st Annual CAMP Conference, May, 2018. Canandaigua, NY.

186. Aslebagh, R., Channaveerappa D., Arcaro  K.F., Darie C.C. Mass Spectrometry-based Proteomics of Human Breast Milk to Identify Potential Breast Cancer Biomarkers. Twelfth International Symposium on Mass Spectrometry in the Health & Life Sciences: Molecular & Cellular Proteomics. August 20-24, 2017, San Francisco, CA.

185. Aslebagh, R., Channaveerappa D., Dupree, E.J., Wormwood, K.L., Woods, A.G., Darie, C.C. Use of mass spectrometry for protein characterization and biomarker discovery. 5th European Chemical Biology Symposium. 2-4 July, 2017, Budapest, Hungary.

184. Dupree, E. J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond, M,. Darie, C.C.  Assessment of the effects of pollutants in the Great Lakes on the human proteome. 31st The Protein Society Annual Conference. July 24-27, 2017, Montreal, Canada.

183. Mihasan, M., Babii, C., Aslebagh, R., Darie C.C. Nicotine-Induced Proteome of Arthrobacter nicotinovorans, 31st The Protein Society Annual Conference. July 24-27, 2017, Montreal, Canada.

182. Channaveerappa, D., *Lux, J.C. , Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C. Mass Spectrometry based Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria. 31st The Protein Society Annual Conference. July 24-27, 2017, Montreal, Canada.

181. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Structural Characterization of Spider Peptide Phα1β using Mass Spectrometry Based Approaches, 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 4-8, 2017. Indianapolis, IN.

180. Dupree, E.J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond M., Darie, C.C.  Assessment of the effects of pollutants in the Great Lakes on the human proteome. 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 4-8, 2017. Indianapolis, IN.

179. Aslebagh, R., Channaveerappa D., Arcaro K.F., Darie C.C., Mass Spectrometry- based Proteomics of Human Breast Milk for Breast Cancer Biomarker Discovery. 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 4-8, 2017. Indianapolis, IN.

178. Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C. Mass Spectrometry based Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria. 65th Annual American Society for Mass Spectrometry (ASMS) Conference on Mass Spectrometry and Allied Topics. June 4-8, 2017. Indianapolis, IN.

177. Dupree, E.J., Crimmins, B., Holsen, T., Pagano, J., Thompson, B., Christensen, K., Raymond M., Darie, C.C.  Assessment of the effects of pollutants in the Great Lakes on the human proteome. American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting. April 22-26, 2017. Chicago, IL.

176. Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Salivary Protein Biomarker Discovery in Autism Spectrum Disorder (ASD), American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting. April 22-26, 2017. Chicago, IL.

175. Aslebagh, R., Arcaro K.F., Darie C.C., Proteomics Analysis of Human Breast Milk to Assess Breast Cancer Risk. American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting. April 22-26, 2017. Chicago, IL.

174. Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C. Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry based Proteomics. American Society of Biochemistry and Molecular Biology (ASBMB) 2017 Annual Meeting. April 22-26, 2017. Chicago, IL.

173. Dupree, E.J., Wormwood, K.L., Borland, M.M., Ryan, J.P., Charette, L., Woods, A.G., Darie, C.C.  Exploring possible biomarkers for Smith-Lemli-Opitz syndrome (SLOS) using a mass spectrometry-based proteomic investigation. Peptidomics: Bridging the Gap between Proteomics and Metabolomics by Mass Spectrometry. January 19-22, 2017. Clearwater Beach, FL.

172. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Mass Spectrometry Based Structural Characterization of Spider Peptide Phα1β, American Society for Mass Spectrometry Sanibel Conference: Peptidomics: Bridging the Gap between Proteomics and Metabolomics by Mass Spectrometry. January 19-22, 2017. Clearwater Beach, FL. 

171. *Dupree, E.J., Wormwood, K.L., *Borland, M.M., Ryan, J.P., Charette, L., Woods, A.G., Darie, C.C.  Exploring possible biomarkers for Smith-Lemli-Opitz syndrome (SLOS) using a mass spectrometry-based proteomic investigation. Eastern Analytical Symposium & Exposition. November 13-16, 2016. Somerset, NJ.

170. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Structural Characterization of Spider Peptide Phα1β by Mass Spectrometry,  Eastern Analytical Symposium and Exposition. November 13-16, 2016. Somerset, NJ. 

169. Channaveerappa, D., *Lux, J., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C., Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry,  Eastern Analytical Symposium and Exposition, November 13-16, 2016, Somerset, NJ.

168. *Duckworth, W., *Brisbin, A., Wormwood, K.L., *Dupree, E.J., *Roberge, J., Channaveerappa, D., Kraus, P., Lufkin, T., Darie, C.C. Mass Spectrometry based proteomic investigation of annulus fibrosus and nucleus pulposus of the mature bovine intervertebral disc, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics. June 5-9, 2016. San Antonio, TX.

167. Wormwood, K.L., *Borland, M., *Dupree, E.J., Woods, A.G., Corbett, B., Darie, C.C. Mass Spectrometry based proteomic investigation of plasma samples from children with Autism Spectrum Disorder (ASD) and matched controls, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics. June 5-9, 2016. San Antonio, TX.

166. Channaveerappa, D., Li, K., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics. June 5-9, 2016. San Antonio, TX.

165. Aslebagh, R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk Using Different Protein Digestion procedures, 64th Annual American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics. June 5-9, 2016. San Antonio, TX.

164. Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C. Mass Spectrometry-Based Proteomic Analysis of Saliva from Children with Autism Spectrum Disorder and Matched Controls. Experimental Biology Conference: American Society for Biochemistry and Molecular Biology Annual Meeting. April 2-6, 2016. San Diego, CA.

163. Channaveerappa, D., Li, K., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines. Experimental Biology Conference: American Society for Biochemistry and Molecular Biology Annual Meeting, April 2-6, 2016. San Diego, CA.

162 Aslebagh, R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics of Human Breast Milk to Assess Breast Cancer Risk Using Different Protein Digestion procedures. Experimental Biology Conference: American Society for Biochemistry and Molecular Biology Annual Meeting, April 2-6, 2016. San Diego, CA.

161. *Chapman, C., *Dupree, E.J., *Borland, M., Wormwood, K.L., Woods, A.G., Darie, C.C., (2015). Proteomic Investigation of Saliva from People with Smith-Lemli-Opitz Syndrome (SLOS) and controls. 2015 Eastern Analytical Symposium, November 16-18, 2015, Somerset, NJ.

160. Aslebagh R., Fliesler S. J., Pfeffer B. A., Darie C. C., Mass Spectrometry Based Proteomics of Oxidative Stress: Investigating of Amino Acids Modifications by 4-hydroxy-2-nonenal (HNE) Using Lysozyme and BSA as Model Proteins, Eastern Analytical Symposium and Exposition, November 2015, Somerset , NJ. 

159. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015). Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. 29th Annual Symposium of the Protein Society, July 2015, Fira De Barcelona – Montjuic, Barcelona, Spain.

158. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Mass Spectrometry based Proteomics to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls. 29th Annual Symposium of the Protein Society, July 2015, Fira De Barcelona – Montjuic, Barcelona, Spain.

157. Aslebagh R., Fliesler S. J., Pfeffer B. A., Darie C. C., Mass spectrometric identification of amino acids modified by 4-hydroxy-2-nonenal (HNE) as a model for proteome-scale analysis of oxidative stress, 63nd American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June 2015, St. Louis, MO.

156. Ngounou Wetie, A.G., Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C., (2015). Comparative two dimensional polyacrylamide gel electrophoresis (2D-PAGE) of the salivary proteome of children with autism spectrum disorder (ASD). 63rd American Society for Mass Spectrometry Conference, June 2015, St. Louis, MO.

155. Woods, A.G., Ngounou Wetie, A.G., Wormwood, K.L., Horn, S., Murrough, J., Iosifescu, D.V., Darie, C.C. (2015), Proteomic investigation of saliva samples from people with major depressive disorder treated with ketamine. 63rd American Society for Mass Spectrometry Conference, June 2015, St. Louis, MO.

154. Wormwood, K.L. , *Dupree, E.J., *Borland, M.M., Charette, L., Woods, A.G., Darie, C.C. (2015), Proteomic investigation of saliva samples from people with Smith-Lemli-Optiz Syndrome (SLOS) and controls. 63rd American Society for Mass Spectrometry Conference, June 2015, St. Louis, MO.

153. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Breast Milk Analysis to Identify Protein Differences in Breast Cancer Samples using Mass Spectrometry, 63rd American Society for Mass Spectrometry Conference, June 2015, St. Louis, MO.

152. Wormwood, K.L., Ngounou Wetie, A.G., Sokolowska, I., Beglinger, K.M., Ryan, J.P., Woods, A.G., Darie, Cel C., (2015). Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. Experimental Biology Society Annual Conference, March 2015, Boston, MA.

151. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, K.F., Darie, C.C. Proteomics Study of Human Breast Milk for Breast Cancer Biomarkers Discovery. American Society for Biochemistry and Molecular Biology (ASBMB) Experimental Biology Society Annual Conference, March 2015, Boston, MA.

150. Channaveerappa, D., Ngounou Wetie, A.G., Lupu, L.M., Robu, A.C., Zamfir, A.D., Darie, C.C. (2015). Investigation of Tumor Differentiation Factor (TDF)-induced cell differentiation using Mass Spectrometry. American Society for Biochemistry and Molecular Biology (ASBMB) Experimental Biology Society Annual Conference, March 2015, Boston, MA.

149. *Dupree, E.J., *Borland, M., Wormwood, K.L., Woods, A.G., Darie, C.C. (2014). Proteomic investigation of saliva from people with Smith-Lemli-Opitz Syndrome (SLOS) and controls. The Eastern Analytical Symposium meeting, Somerset, NJ.

148. Lupu, L.M., *Borland, M., Vukelik, Z., Darie, C. C., Zamfir, A.D. (2014). Screening and sequencing of gangliosides from human glioblastoma multiforme by high performance mass spectrometry. The Eastern Analytical Symposium meeting, Somerset, NJ.

147. Robu, A.C., *Borland, M., Sarbu, M., Darie, C. C., Peter-Katalinic, J., Zamfir, A.D. (2014). Identification of the O-glycoforms expressed in the urine of a patient suffering from Schindler disease using chip-based nanoelectrospray tandem mass spectrometry. The Eastern Analytical Symposium meeting, Somerset, NJ.

146. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. (2014). Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics. The Eastern Analytical Symposium meeting, Somerset, NJ.

145. Wormwood, K.L., Ngounou, Wetie A.G. Sokolowska, I., Beglinger, K.M.*, Ryan, J.P., Woods, A.G., Darie, C.C. (2014). Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. The Eastern Analytical Symposium meeting, Somerset, NJ.

144. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., *Talbot, C., Woods, A.G., Darie, C.C. (2014). Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. The Eastern Analytical Symposium meeting, Somerset, NJ.

143. Channaveerappa, D., Ngounou Wetie, A.G., Lupu, L.M., Robu, A.C., Zamfir, A.D., Darie, C.C. (2014). Investigation of Tumor Differentiation Factor (TDF)-induced cell differentiation using Mass Spectrometry based Proteomics. The Eastern Analytical Symposium meeting, Somerset, NJ.

142. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics, 62nd American Society for Mass Spectrometry Conference on Mass Spectrometry and Allied Topics, June 2014, Baltimore, MD.

141. Wormwood, K.L., *Dupree, E., Sokolowska, I., *Beglinger, K.M., Ryan, J.P., Woods, A.G., Darie, C.C., Ngounou, Wetie A.G. Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. The American Society for Mass Spectrometry meeting June 2014, Baltimore, MD.

140. *Beglinger, K.M., *Dupree, E. J., Wormwood, K. L., Ngounou, Wetie A.G., *Skavina, R. A., *Amaro, L., Ryan, J. P., Darie, C. C., Woods, A. G. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. The American Society for Mass Spectrometry meeting, June 2014, Baltimore, MD.

139. Petrareanu, C., Sokolowska, I., Macovei, A., Woods, A.G., Radu, L.G., Darie, C.C., Brinza-Nichita, N. Comparative proteomic analysis reveals novel components at the plasma membrane of differentiated HepaRG cells. The American Society for Mass Spectrometry meeting, March 2014 (abstract accepted) & June 2014 (poster accepted), Baltimore, MD.

138. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., *Talbot, C., Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. The American Society for Mass Spectrometry meeting, June 2014, Baltimore, MD.

137. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., *Talbot, C., Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Protein and Antibody Engineering Summit (PEGS), May 2014, Boston, MA.

136. *Beglinger, K.M., Ngounou Wetie A.G., Sokolowska, I., *Wormwood, K.L., *Mattingly, J.W., Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, The 2013 Smith-Lemli-Opitz Family and Medical Conference, June, 2013, Pittsburgh, PA.

135. *Wormwood, K.L., Ngounou Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, The 2013 Smith-Lemli-Opitz Family and Medical Conference, June, 2013, Pittsburgh, PA.

134. Woods, A.G., Connoly, J., Ngounou Wetie, A.G., Cojocariu, C., Gethings, L., Hammond, J., Ryan, J.P., Darie, C.C. A TransOmics study of the saliva of children with autism spectrum disorder using high definition mass spectrometry. The American Society for Mass Spectrometry meeting, June 2013, Minneapolis, MN.

133. Petrareanu, C., Sokolowska, I., Macovei, A., Woods, A.G., Darie, C.C., Branza-Nichita N. Proteomic investigation of the mechanism of infection of Hepatitis B virus (HBV) in HepaRG cells. The American Society for Mass Spectrometry meeting, June 2013, Minneapolis, MN.

132. Ngounou Wetie, A.G., Sokolowska, I., Pinguang Y.*, Roy, U., Woods, A.G., Darie, C.C. Proteomic investigation of the Tumor Differentiation Factor (TDF)-induced cell differentiation. The American Society for Mass Spectrometry meeting, June 2013, Minneapolis, MN.

131. Sokolowska, I., Ngounou Wetie, A.G., Roy, U., *Talbot, C., Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. The American Society for Mass Spectrometry meeting, June 2013, Minneapolis, MN.

130. *Wormwood, K.L., Ngounou, Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, The American Society for Mass Spectrometry meeting, June 2013, Minneapolis, MN.

129. *Beglinger, K.M., Ngounou, Wetie A.G., Sokolowska, I., *Wormwood, K.L., *Mattingly, J.W., Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, The American Society for Mass Spectrometry meeting, June 2013, Minneapolis, MN.

128. Sokolowska, I., Ngounou Wetie, A.G., *Talbot, C., Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Laboratory Science Equipment Conference and Exposition - Pittcon 2013. March 17-21, 2013, Philadelphia, PA.

127. Mathur, S., Sokolowska, I., *Butkiewicz, M., *Yakubu, R., *Talbot, C., *Samson, J.,  Woods, A.G., Darie, C.C. Prostate Androgen Regulated (PAR) protein and Tumor Differentiation Factor (TDF) as serum biomarkers in sera of patients with cancer. 58th ASMS Conference on Mass Spectrometry, May 23-28, 2010, Salt Lake City, UT.

126. Sokolowska, I., Mathur, S., *Butkiewicz, M., *Yakubu, R., *Talbot, C., *Samson, J., Gawinowicz, M.A. Woods, A.G., Darie, C.C. New proteomics approaches for biomarker discovery. 58th ASMS Conference on Mass Spectrometry, May 23-28, 2010, Salt Lake City, UT.

125.  Darie C.C., Cardasis H.L., Deihardt K, Zhang G., Shetty V., Chao M.V., Neubert T.A. (2009). Analysis by Blue Native PAGE and mass spectrometry of protein-protein interactions within EphB2-NG108 cells in response to ephrinB1-Fc stimulation. 56th American Society for Mass Spectrometry Conference, Philadelphia, PA.

124.  Darie C.C., Platica M., Ionescu A., Platica O. (2009). Prostate Androgen Regulated protein regulates the cell cycle. 100th American Association for Cancer Research Conference, Denver, CO.

123.  Darie C.C., Spellman D.S., Zhang G., Shetty V., Neubert T.A. (2008). Analysis by Blue Native PAGE and mass spectrometry of protein-protein interactions within EphB2-NG108 cells in response to ephrinB1-Fc stimulation. 56th American Society for Mass Spectrometry Conference, Denver, CO.

122.  Darie C.C., Spellman D.S., Zhang G., Cardasis H.L., Xu C., Blais S., Fenyo D., Neubert, T.A. (2007). Analysis of the EphB2 signal transduction pathway upon ephrinB1-Fc stimulation. 1st International Conference on Applications of Mass Spectrometry in Life Safety (NATO sponsored event), Herculane, Romania.

121.  Darie C.C., Biniossek M. L., Gawinowicz M.A., Milgrom Y, Jovine L., Litscher E. S., Wassarman P. M. (2007). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. 1st International Conference on Applications of Mass Spectrometry in Life Safety (NATO sponsored event), Herculane, Romania.

120. Spellman D.S., Cardasis H.L., Jordan B.A., Darie C., Ziff E.B., Chao M.V., Neubert T.A. (2007). SILAC in Cultured Primary Neurons: Application to BDNF Induced Phosphotyrosine Proteome Changes and Differential Protein Abundance of Postsynaptic Densities. The 55th American Society for Mass Spectrometry Conference, Indianapolis, IN.

119. Darie C., Spellman D.S., Shetty V., Chen W., Neubert T.A. (2007). Analysis of protein-protein interactions within EphB2-NG108 cells in response to ephrinB1-Fc stimulation. The 55th American Society for Mass Spectrometry Conference, Indianapolis, IN.

118.  Darie C.C., Biniossek M. L., Gawinowicz M.A., Milgrom Y, Jovine L., Litscher E. S., Wassarman P. M. (2005). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. The 2005 Eastern Analytical Symposium, Somerset, NJ.

117. Darie C., Biniossek M. L., Gawinowicz M.A., Milgrom Y, Jovine L., Litscher E. S., Wassarman P. M. (2005). Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Gordon Research Conference: Toxicogenomics. Colby-Sawyer College, New London, NH

116. Wassarman P.M., Darie C., Jovine L., Litscher E.S., Qi H., Williams Z. (2004). Polypeptide domains and motifs that control assembly of zona pellucida glycoproteins. L-04. The 4th International Symposium on the Molecular and Cell Biology of Egg- and Embryo-coats. MielPearl Ise Shima, Shima, Mie Prefecture, Japan.

115. Jovine L., Qi H., Williams Z., Darie C., Litscher E.S., Wassarman P.M. (2004). A duplicated motif controls assembly of ZP domain proteins. The 4th International Symposium on the Molecular and Cell Biology of Egg- and Embryo-coats. MielPearl Ise Shima, Shima, Mie Prefecture, Japan.

114.  Darie C., Sujak A., Haehnel W. (2002). Four dimensional isolation of the Ndh complex from maize thylakoids, Cambridge University, Cambridge, UK.

113.  Darie C., Mutschler B., Haehnel W. (2001). Studies of the NAD(P)H: Plastoquinone oxidoreductase, Transient protein-protein complexes, Aarchus, Denmark.

(* represents undergraduate students, ** represents high school students)

112. Jayaweera, T.; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and downregulation of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in gel digestion based Proteomics. Center for Advanced Material Processing (CAMP) Annual Technical Meeting, May 2023, Corning, NY.

111. Weraduwage K.*; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down regulation of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in-solution digestion-based Proteomics. Center for Advanced Material Processing (CAMP) Annual Technical Meeting, May 2023, Corning, NY.

110. *Von Holtz, R.; Darie Ion, L.; Darie, C.C; Petre, B.A. Mass spectrometric based approach for lysosomal storage diseases diagnostic in newborns. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

109. *Sullivan, I.; *Mutsengi, P.; Whitham, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. An investigation into triple negative breast cancer and matched controls using proteomics study to identify protein biomarkers for breast cancer. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

108. *Seymour L.; *Mutsengi, P.; Whitham, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. A proteomics investigation of human sera from African American donors with invasive ductal carcinoma breast cancer and matched controls. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

107. *Carlson, J.; Whitham, D.; Aslebagh, R.; Channaverrappa, D.; Pentecost, B.; Arcaro, K.F.; Darie, C.C. Proteomic analysis of human breast milk to reveal potential protein biomarkers for breast cancer. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

106. *Donnelly, M.; Jayathirtha, M.; Whitham, D.; *Alwine, S.; Darie, C.C. Investigation of the effects of human jumping translocation breakpoint (hJTB) protein for potential use as a cancer biomarker. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

105. *Pelkey, I.; *Donnelly, M.; *Yorkey, H.; Whitham, D.; Darie, C.C. Optimization of the in-gel trypsin digestion for proteomics applications. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

104. Whitham D.; *Sullivan I.; Pentecost, B.; Arcaro K.F.; Darie C.C. A proteomics investigation of human serum from donors with triple negative breast cancer and matched controls. ACS North Easter Regional Meeting (NERM), Oct 2022, Rochester, NY.

103. Jayathirtha, M.; Whitham, D.; Channaveerappa, D.; Darie, C.C. Investigation of the effects of human jumping translocation breakpoint (hJTB) protein using mass spectrometry based proteomics. CAMP Annual Technical Meeting, May 2022, Clayton, NY.

102. *Jayaweera, T.; Darie Ion, L.; Darie, C.C.; Petre, B.A. Multiplex mass spectrometry for enzymatic activities screening of lysosomal storage diseases. CAMP Annual Technical Meeting, May 2022, Clayton, NY.

101. *Manzoor, Z., Dupree, E. J., Crimmins, B., Holsen, T.M., Darie C.C. Proteomic analysis of the heart tissue from lake trout (Salvelinus namaycush), ACS NERM, June 2019, Saratoga, NY.

100. *Alwine, S., Dupree, E. J., Crimmins, B., Holsen, T.M., Darie C.C. Proteomic analysis of the blood from lake trout (Salvelinus namaycush), ACS Northeast Regional Meeting (NERM), June 2019, Saratoga, NY.

99. Channaveerappa, D., *Lux, J.C., Panama, B.K., Darie C.C. Mass Spectrometry based Proteomics to Investigate the Molecular Changes in Rat Atria during Obstructive Sleep Apnea, ACS NERM, June 2019, Saratoga, NY.

98. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines 10th Annual American Chemical Society Research Symposium, March 2019, Plattsburgh, NY.

97. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Mass Spectrometry based Proteomics to Investigate and Characterize the Jumping Translocation Breakpoint (JTB) Protein using Cancer Cell Lines, 31st Annual CAMP Conference, May, 2018. Canandaigua, NY.

96. van Doorn, W.P.T.M., Kadambar, V.K., Meex, S.J.R., Melman, A., Darie, C.C. Reduction and binding of 2-nitroimidazoles to proteins: an in vitro study using lysozyme and albumin, 31st Annual CAMP Conference, May, 2018. Canandaigua, NY.

95. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., *Lux, J., Panama, B.K., Darie, C.C.  Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. 31st Annual CAMP Conference, May, 2018. Canandaigua, NY.

94. Jayathirtha, M., Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry. 36th Annual Graduate Student Symposium, Department of Chemistry, SUNY Buffalo, May 2018, Buffalo, NY.

93. van Doorn, W.P.T.M., Kadambar, V.K., Meex, S.J.R., Melman, A., Darie, C.C. Reduction and binding of 2-nitroimidazoles to proteins: an in vitro study using lysozyme and albumin,  36th Annual Graduate Student Symposium, Department of Chemistry, SUNY Buffalo, May 2018, Buffalo, NY.

92. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., *Lux, J., Panama, B.K., Darie, C.C. Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea, 36th Annual Graduate Student Symposium, Department of Chemistry, SUNY Buffalo, May 2018, Buffalo, NY.

91. *Dupree, E.J., *Roberge J.A., *Brisbin, A.M. , Channaveerappa, D., Kraus, P.M., Lufkin, T.C., Darie, C.C. Proteomic Investigation of Annulus Fibrosus and Nucleus Pulposus of the Mature Bovine Intervertebral Disc. McNair Undergraduate Student Symposium at SUNY Buffalo, July 2015, Buffalo, NY.

90. *Dupree, E., *Borland, M., Wormwood, K.L., Woods, A.G., Darie C. C., M Proteomic Investigation of Saliva from Patients with Smith-Lemli-Opitz Syndrome (SLOS) and Controls (2015). Northeast Regional ACS Meeting, June 2015, Ithaca, NY. 

89. Ngounou Wetie, A.G., Wormwood, K.L., Charette, L., Ryan, J.P., Woods, A.G., Darie, C.C., (2015). Comparative two dimensional polyacrylamide gel electrophoresis (2D-PAGE) of the salivary proteome of children with autism spectrum disorder (ASD). 33nd Annual Chemistry Graduate Student Symposium, SUNY Buffalo, May 2015, Buffalo, NY. 

88. Aslebagh, R., Ngounou Wetie, A.G., Channaveerappa, D., Arcaro, K.F., Darie, C.C., Proteomics Study of Human Breast Milk for Breast Cancer Biomarkers Discovery. 33nd Annual Chemistry Graduate Student Symposium, SUNY Buffalo, May 2015, Buffalo, NY. 

87. Wormwood, K.L., Ngounou Wetie, A.G., Charette, L., Ryan, J.P., Dupree, E.J., Woods, A.G., Darie, C.C., (2015). Mass Spectrometry-Based Protein Biomarker Discovery in Neurodevelopmental Disorders. Graduate Student Symposium, SUNY Buffalo, Buffalo, NY. 

86. Channaveerappa, D., Aslebagh, R., Arcaro, K.F., Darie, C.C. (2015). Proteomics Study to Identify the Protein Differences in Human Breast Milk from Breast Cancer Patients and Controls Using Mass Spectrometry. 33nd Annual Chemistry Graduate Student Symposium, SUNY Buffalo, May 2015, Buffalo, NY. 

85. *Dupree, E.J., *Borland, M., Wormwood, K.L., Woods, A.G., Darie, C.C. Proteomic investigation of saliva from people with Smith-Lemli-Opitz Syndrome (SLOS) and controls. McNair Undergraduate Student Symposium at University of Buffalo, June 2014, Buffalo, NY.

84. Roy, U., Woods, A.G., Darie, C.C. , Molecular Dynamics Simulation of Tumor Differentiation Factor Peptide (TDF-P1), Poster presented at CAMP Annual Technical Meeting, May 2014, Saratoga Springs, NY.

83. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics for Identifying Breast Cancer Biomarkers in Human Breast Milk, 32nd Annual Chemistry Graduate Student Symposium, SUNY Buffalo, May 2014, Buffalo, NY.

82. Wormwood, K.L., Ngounou Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls. 32nd ACS Graduate Student Symposium at SUNY Buffalo, May 2014, Buffalo, NY.

81. *Beglinger, K.M.*, *Wawro, B.*, Wormwood, K. L., Ngounou, Wetie A.G., *Skavina, R. A., *Amaro, L., *Dupree, E. J., Ryan, J. P., Woods, A. G., Darie, C. C. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. Graduate Student Symposium at SUNY Buffalo, May 2014, Buffalo, NY.

80. Ngounou Wetie, A.G., Sokolowska, I., Roy U., *Talbot, C., Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. Chemistry Graduate Student Symposium at the University at Buffalo, May 2014, Buffalo, NY.

79. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. Mass Spectrometry-Based Proteomics for Identifying Breast Cancer Biomarkers in Human Breast Milk, 5th Annual Local ACS Undergraduate and Graduate Chemistry & Biology Research Symposium, State University of New York at Plattsburgh, April 2014, Plattsburgh, NY.

78. Wormwood, K.L., Ngounou Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls. Northern New York American Chemical Society 5th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2014, Plattsburgh, NY.

77. *Beglinger, K.M., *Wawro, B., Wormwood, K. L., Ngounou, Wetie A.G., *Skavina, R. A., *Amaro, L., *Dupree, E. J., Ryan, J. P., Woods, A. G., Darie, C. C. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. Northern New York American Chemical Society 5th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2014, Plattsburgh, NY.

76. Ngounou Wetie, A.G., Sokolowska, I., Roy, U., *Talbot, C., Woods, A.G., Darie, C.C. Mass spectrometry analysis of NXS/T glycosylation sites in recombinant glycoproteins. ACS NNY meeting at SUNY Plattsburgh, April 2014, Plattsburgh, NY.

75. Roy, U., Sokolowska, I., Woods, A.G., Darie, C.C. Structural Investigation of Tumor Differentiation Factor (TDF) and its Receptor (TDF-R), Poster presented at CAMP Annual Technical Meeting, May16 2013, Saratoga Springs, NY.

(* represents undergraduate students, ** represents high school students)

74. Ienciu S.I.; Whitham D.; Petrica L.; Anca, S.; Zamfir, A.D.; Darie C.C. Identification and characterization of proteins as blood and urinary biomarkers in chronic kidney disease and stroke. Annual Research and Projects showcase (RAPS). Clarkson University, July 2023. Potsdam, NY.

73. Arshad, A., Darie, C.C. Checks and balances in a Proteomic Experiment: Tests on Bovine Serum Albumin (BSA). Research and Projects Showcase (RAPS), April 2023, Clarkson University, Potsdam, NY

72. Bruno P.; Whitham, D.; Mutsengi, P.; Pentecost, B.T. ; Arcaro, K. F.; Darie, C.C. A Proteomic Investigation of Human Serum from donors with triple-negative breast cancer and matched controls to identify Protein Biomarkers for Breast Cancer Detection. Research and Projects Showcase (RAPS), April 2023, Clarkson University, Potsdam, NY

71. Jayaweera, T.; Jayathirtha, M.; Whitham, D..; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in gel digestion based Proteomics. Seventh annual Research and Projects Showcase (RAPS), April 2023, Clarkson University, Potsdam, NY

70. Pelkey I*, Mortimer A*, Whitham D, Darie, CC. Optimization of the in-gel trypsin digestion for proteomics applications. Clarkson University Research and Projects Showcase (RAPS), Potsdam NY. April 2023

69. Lowe, J*; Whitham, D; Aslebagh, R; Channaveerappa, D; Pentecost, BT; Arcaro, KF; Darie, CC. Proteomic analysis of human breast milk using mass spectrometry to reveal protein biomarkers for early breast cancer detection. Clarkson University Research and Projects Showcase (RAPS), Potsdam NY. April 2023

68. Haaker, N*; Mutsengi, P*; Whitham, D; Pentecost, BT; Darie, CC. A proteomics investigation of Human sera from African American donors with invasive ductal carcinoma breast cancer and matched controls. Clarkson University Research and Projects Showcase (RAPS), Potsdam NY. April 2023

67. Hukovic, A.*; Whitham D.; Pentecost B.T.; Darie C.C. Proteomics Analysis of sera from a Hispanic woman with triple negative breast cancer and a matched control: A case study investigation for biomarker discovery. Annual Research and Projects showcase (RAPS). Clarkson University, July 2023. Potsdam, NY

66. Adumitresei I.*; LaBarge B.*; Baxter E.*; Jayaweera T.; Whitham D.; Darie C.C. Determination of protein level differences between different types of nuts. Annual Research and Projects showcase (RAPS). Clarkson University, July 2023. Potsdam, NY.

65. Strong III J.*; Whitham D.; Sullivan I.; Haaker N.; Pentecost B.T.; Darie C.C. A proteomic analysis of human serum from donors with triple negative breast cancer and matched controls to identify protein biomarkers for breast cancer detection. Annual Research and Projects showcase (RAPS). Clarkson University, July 2023. Potsdam, NY.

64. Weraduwage K.*; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down regulation of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in-solution digestion-based Proteomics. Seventh annual Research and Projects Showcase (RAPS), July 2023, Clarkson University, Potsdam, NY.

63. Arshad, A., Darie, C.C. Checks and balances in a Proteomic Experiment: Tests on Bovine Serum Albumin (BSA). ACS-NNY Chemistry Meets Biology Conference, April 2023, Clarkson University, Potsdam, NY

62. Bruno P.; Whitham, D.; Mutsengi, P.; Pentecost, B.T. ; Arcaro, K. F.; Darie, C.C. A Proteomic Investigation of Human Serum from Donors with Triple Negative Breast Cancer and Matched Controls. ACS-NNY Chemistry Meets Biology Conference, April 2023, Clarkson University, Potsdam, NY

61. Jayaweera, T.; Jayathirtha, M.; Whitham, D.; Darie, C.C. Investigation the effects of overexpression and down expression of Human jumping translocation breakpoint protein (hJTB) in MCF7 cells using in gel digestion based Proteomics. ACS-NNY Chemistry meets Biology Conference, April 2023, Clarkson University, Potsdam, NY

60. Haaker, N*, Mutsengi, P*, Whitham D, Pentecost BT, Darie, CC. A proteomics investigation of Human sera from African American donors with invasive ductal carcinoma breast cancer and matched controls. American Chemical Society, Chemistry Meets Biology, Potsdam NY. April 2023

59. Mortimer A*, Pelkey I*, Whitham D, Darie, CC. Optimization of the in-gel trypsin digestion for proteomics applications. American Chemical Society, Chemistry Meets Biology, Potsdam NY. April 2023

58. Lowe J*, Whitham D, Aslebagh R, Channaveerappa D, Pentecost BT, Arcaro KF, Darie, CC. Proteomic analysis of human breast milk using mass spectrometry to reveal protein biomarkers for early breast cancer detection. American Chemical Society, Chemistry Meets Biology, Potsdam NY. April 2023

57. Seymour L*, Mutsengi, P*, Whitham D, Pentecost BT, Darie, CC. An investigation into triple negative breast cancer and matched controls using proteomics study to identify protein biomarker for breast cancer. American Chemical Society, Chemistry Meets Biology, Potsdam NY. April 2023

56. Morrissiey H*, Mutsengi, P*, Whitham D, Egwang T, Owalla TJ, Darie, CC. Proteomics investigation of Ugandan mothers for the presence of plasmodium and viral proteins in breast milk. American Chemical Society, Chemistry Meets Biology, Potsdam NY. April 2023

55. *Donnelly, M., Whitham, D., Darie, C. C. Optimization of the in-gel trypsin digestion for proteomics applications. 6th Annual Research and Projects Showcase (RAPS). Clarkson University, July 2021, Potsdam, NY.

54. *Mutsengi, P., Whitham, D., Egwang, T., Owalla, T. J., Darie, C.C. Proteomics investigation of Ugandan mothers for the presence of Plasmodium and viral proteins in breast milk. 6th Annual Research and Projects Showcase (RAPS). Clarkson University, July 2021, Potsdam, NY.

53. Jayathirtha, M., Whitham, D., Channaveerappa, D., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics. 5th Annual Research and Projects Showcase, (e-RAPS) (virtual), April, 2021, Potsdam, NY.  

52. Whitham, D., Aslebagh, R., Channaveerappa, D., Pentecost, B., Arcaro, K. F., Darie, C. C. Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. 5 th Annual Research and Projects showcase (RAPS) (virtual), April 2021. Potsdam, NY. 

51. Jayathirtha, M., Channaveerappa, D., Li, K.N., Darie, C.C. Investigation and Characterization of the Jumping Translocation Breakpoint (JTB) protein using Mass Spectrometry based Proteomics (virtual), 4th Annual Research and Projects Showcase, (e-RAPS), Clarkson University, April, 2020, Potsdam, NY. 

50. Dupree, E. J., Crimmins, B., Holsen., T., Pagano, J., Thompson, B., Christensen, K., Raymond, Meiman, J., Darie, C.C.  Effects to the human proteome due to legacy chemical exposure in the Great Lakes (virtual), 4th Annual Research and Projects Showcase, (e-RAPS), Clarkson University, April, 2020, Potsdam, NY. 

49. Whitham, D.; Aslebagh, R.; Channaveerappa, D.; Pentecost, B.; Arcaro, K. F.; Darie, C. C.  Proteomic Analysis of Human Breast Milk to Reveal Potential Protein Biomarkers for Breast Cancer. (virtual), 4th Annual Research and Projects Showcase, (e-RAPS), Clarkson University, April, 2020, Potsdam, NY. 

48. Dumbrăveanu, C., Jayathirtha, M., Channaveerappa, D., Lux, J., Panama, B., Darie, C.C. Mass Spectrometry based Proteomics Approach to Identify Biomarkers for the Diagnosis and Treatment of Obstructive Sleep Apnea. Research and Project Showcase (RAPS), Clarkson University, July, 2018, Potsdam, NY.

47. Jayathirtha, M., Channaveerappa, D., *Lux, J.C., Wormwood, K.L., McLerie, M., Panama, B.K., Darie C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry, 9th Annual American Chemical Society Research Symposium, Mar, 2018, SUNY Potsdam, NY.

46. *Lux, J., Channaveerappa, D.,  Wormwood, K.L., Meredith, M., Panama, B.K., Darie, C.C. Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry. Clarkson University Summer SURE conference, July 2017, Potsdam, NY.

45. Dupree, E.J. , Wormwood, K.L., *Borland, M.M., Ryan, J.P., Charette, L., Woods, A.G., Darie, C.C.  Exploring possible biomarkers for Smith-Lemli-Opitz syndrome (SLOS) using a mass spectrometry-based proteomic investigation. Clarkson University Graduate Student Symposium. November 17, 2016. Potsdam, NY.

44. Wormwood, K.L., Ngounou Wetie, A.N., Gomez, M.V., Darie, C.C. Structural Characterization of Spider Peptide Phα1β by Mass Spectrometry, Clarkson University Graduate Student Symposium. November 17, 2016. Potsdam, NY. 

43. Channaveerappa, D., *Lux, J., Wormwood, K.L., McLerie, M., Panama, B. K., Darie, C. C., Proteomics Investigation of Induced Obstructive Sleep Apnea (OSA) in Rat Atria using Mass Spectrometry,  Clarkson University Graduate Research Symposium, December 2016, Potsdam, NY.

42. *Deng, X., Aslebagh, R., Wormwood, K.L., Arcaro, K.F. & Darie, C.C. Mass Spectrometry-Based Proteomics for Identifying Breast Cancer Biomarkers in Human Breast Milk. 18th Annual Spring Symposium on Undergraduate Research Experiences.  April 16, 2016.  Clarkson University, Potsdam, NY.

41. *Dupree, E.J., *Roberge J.A., *Brisbin, A.M., Channaveerappa, D., Kraus, P.M., Lufkin, T.C., Darie, C.C. Proteomic Investigation of Annulus Fibrosus and Nucleus Pulposus of the Mature Bovine Intervertebral Disc. Clarkson University Summer SURE Conference, July 2015, Potsdam, NY.

40. Aslebagh, R., Channaveerappa, D., Ngounou Wetie, A.G., Schneider, S. S., Sturgeon, S. R., Arcaro, K.F., Darie, C.C. (2014). Using Breast Milk to Assess Breast Cancer Risk: The Role of Mass Spectrometry-Based Proteomics. The First Clarkson University Graduate Student Symposium meeting (local meeting), Potsdam, NY.

39. Wormwood, K.L., Ngounou, Wetie A.G. Sokolowska, I., *Beglinger, K.M., Ryan, J.P., Woods, A.G., Darie, C.C. (2014). Proteomic investigation of sera and saliva samples from children with Autism Spectrum Disorder (ASD) and matched controls. The First Clarkson University Graduate Student Symposium meeting (local meeting), Potsdam, NY.

38. Channaveerappa, D., Ngounou Wetie, A.G., Lupu, L.M., Robu, A.C., Zamfir, A.D., Darie, C.C. (2014). Investigation of Tumor Differentiation Factor (TDF)-induced cell differentiation using Mass Spectrometry based Proteomics (2014). The First Clarkson University Graduate Student Symposium meeting (local meeting), Potsdam, NY.

37. *Dupree, E.J., *Borland, M., Wormwood, K.L., Woods, A.G., Darie, C.C. Proteomic investigation of saliva from people with Smith-Lemli-Opitz Syndrome (SLOS) and controls. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

36. Lupu, L.M., Vukelik, Z., Darie, C. C., Zamfir, A.D. Screening and sequencing of gangliosides from human glioblastoma multiforme by high performance mass spectrometry. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

35. Robu, A.C., Sarbu, M., Darie, C. C., Peter-Katalinic, J., Zamfir, A.D. Identification of the O-glycoforms expressed in the urine of a patient suffering from Schindler disease using chip-based nanoelectrospray tandem mass spectrometry. Clarkson University Summer SURE Conference, July 2014, Potsdam, NY.

34. *Beglinger, K.M., *Wawro, B., Wormwood, K. L., Ngounou, Wetie A.G., *Skavina, R. A., *Amaro, L., *Dupree, E. J., Ryan, J. P., Woods, A. G., Darie, C. C. Proteomic investigation of saliva from children with Autism Spectrum Disorder and matched controls by SDS-PAGE and LC-MS/MS. Clarkson University Spring SURE Conference, April 2014, Potsdam, NY.

33. **Woods, B.L., *Wormwood, K.L., Darie, C.C. Biochemical investigation of white and brown eggs, 14th Annual SUMMER Symposium on Undergraduate Research Experiences, Clarkson University, August 2013, Potsdam, NY.

32. *Wormwood, K.L., Ngounou Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U., Ryan, J.P., Woods, A.G., Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, 14th Annual SUMMER Symposium on Undergraduate Research Experiences, Clarkson University, August 2013, Potsdam, NY.

31. *Wormwood, K.L., Ngounou, Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls. Northern New York American Chemical Society 4th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2013, Canton, NY.

30. *Beglinger, K.M., Ngounou, Wetie A.G., Sokolowska, I., *Wormwood, K.L., *Mattingly, J.W., Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, Northern New York American Chemical Society 4th Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2013, Canton, NY. 

29. *Wormwood, K.L., Ngounou, Wetie A.G., Sokolowska, I., *Beglinger, K.M., *Mattingly, J.W., Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of sera and saliva from children with Autism Spectrum Disorder and matched controls, 14th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2013, Potsdam, NY. 

28. *Beglinger, K.M., Ngounou, Wetie A.G., Sokolowska, I., *Wormwood, K.L., *Mattingly, J.W, Roy, U. Ryan, J.P. Woods, A.G. Darie, C.C. Proteomic investigation of saliva from children with Autism Spectrum Disorder (ASD) and matched controls during circadian rhythmicity, 14th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2013, Potsdam, NY.

27. *Wormwood, K.L., *Butkiewicz, M., Woods, A. G., Ngounou Wetie, A.G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder. 14th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2012, Potsdam, NY.

26. Ngounou Wetie, A.G., Sokolowska, I., Woods, A.G., Darie, C.C., Investigation of the differentiation effect of the Tumor Differentiation Factor (TDF) on breast and prostate cancer cell lines. Northern New York American Chemical Society 3rd Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2012, Potsdam, NY.

25. Baral, R., Ngounou Wetie, A.G., Darie, C.C., Wallace, K., Differential proteomics experiment on zebrafish wildtype and Pia mutants. Northern New York American Chemical Society 3rd Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2012, Potsdam, NY.

24. Sokolowska, I., Woods, A.G., Sandu, C., Darie, C.C., Tumor Differentiation Factor (TDF), novel factor identified in selected neurons of central nervous system (CNS). Northern New York American Chemical Society 3rd Annual Undergraduate and Graduate Chemistry and Biology Research Symposium, April 2012, Potsdam, NY.

23. *Wegner, A. & Darie, C.C., Introduction to Proteomics and its use to Identify Serum Biomarkers. Annual SUMMER Symposium on Undergraduate Research Experiences, Clarkson University, July 2011, Potsdam, NY.

22. *Yakubu, R., Sokolowska, I., Mathur, S., Darie, C.C. Biomarker Discovery through the use of Proteomics Tools, 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

21. *Butkiewicz, M., Woods, A. G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder. 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

20. LaFleur, M., Sokolowska, I., Darie, C.C., Over-expression, purification and characterization of Tumor Differentiation Factor protein, 13th Annual SPRING Symposium on Undergraduate Research Experiences, Clarkson University, April 2011, Potsdam, NY.

19. *Yakubu, R., Sokolowska, I., Mathur, S., Darie, C.C., Biomarker Discovery through the use of Proteomics Tools, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

18. *Butkiewicz, M., Woods, A. G., Darie, C.C., Identification of Serum Protein Biomarkers for Autism Spectrum Disorder, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

17. Sokolowska, I., *LaFleur, M., Gawinowicz, M. A., Woods, A. G., Darie, C.C., Investigation of Tumor Differentiation Factor and its receptor - potential serum biomarker and therapeutic target in breast and prostate cancer, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

16. *LaFleur, M., Sokolowska, I., Darie, C.C., Over-expression, purification and characterization of Tumor Differentiation Factor protein, 2nd Annual Chemistry Research Symposium, Northern New York Local Section, SUNY Potsdam, April 2011, Potsdam, NY.

15. *Yakubu, R., Sokolowska, I., Mathur, S., Darie, C.C., Biomarker Discovery through the use of Proteomics Tools, Honors Program, Clarkson University, April 2011, Potsdam, NY.

14.  *Butkiewicz, M. & Darie, C.C.. Identification of a biomarker in autism spectrum disorders. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY.

13.  *LaFleur, M. & Darie, C.C. The use of second dimension in the examination of proteins in sera from patients with various forms of cancer and from normal subjects. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY.

12. *Zielewicz, L. & Darie, C.C. Screening for low molecular weight serum protein biomarkers for prostate and cervical cancer. 12th Summer Symposium on Undergraduate Research Experiences, July 29, 2010, Potsdam, NY.

11. Mathur, S., Sokolowska, I., *Butkiewicz, M., *Yakubu, R., *Talbot, C., *Samson, J., Woods, A.G., Darie, C.C.. Jumping Translocation Breakpoint protein and Tumor Differentiation Factor (TDF) as serum biomarkers in patients with cancer. 37th North East Regional Meeting of the American Chemical Society, Undergraduate and graduate student poster session, June 2-5, 2010, Potsdam, NY.

10. Sokolowska, I., Mathur, S., *Butkiewicz, M., *Yakubu, R., *Talbot, C., *Samson, J., Gawinowicz, M.A. Woods, A.G., Darie, C.C. New proteomics approaches for biomarker discovery. 37th North East Regional Meeting of the American Chemical Society, Undergraduate and graduate student poster session, June 2-5, 2010, Potsdam, NY.

9. Darie C., Mutschler B., Biniossek M., Winter V., Haehnel W. (2002). Studies of the NAD(P)H:  Plastoquinone oxidoreductase (Ndh Complex) from maize chloroplasts, The Annual German Botanical Congress, Freiburg, Germany.

8.  Darie C. (2001). Recombinant DNA technology, language and brain; language affinity, neuronal and genetic bases, Feldberg, BW, Germany.

7. Darie C., Drepper F., Mutschler B., Haehnel W. (2001). Isolation and functional characterization of the plastidial NAD(P)H-dehydrogenase from Zea mays, SFB 388, Zellulaere Funktionen Dynamischer Proteinwechselwirkungen, Freiburg, Germany.

6.  Darie C. (2001). Chlororespiration and poising of cyclic electron transport; Plastoquinone as electron transporter between thylakoid NADH-Dehydrogenase and peroxidase, Graduiertenkolleg "Biochemistry of enzymes," Feldberg, BW, Germany.

5.  Darie C. (2001).Two dimensional gel electrophoresis and mass spectrometry for proteome analysis, Department of Biochemistry, University of Freiburg, Freiburg, Germany.

4.  Darie C. (2001). Isolation of the Ndh complex from chloroplasts from Zea mays, 18th Photosynthesis congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Faculty of Biology, University Konstanz, Konstanz, Germany.

3.  Darie C. (2000). Plastidial NAD(P)H-dehydrogenase, Graduiertenkolleg "Biochemistry of enzymes". Institute of Physical Chemistry, University Freiburg, Freiburg, Germany.

2.  Darie C. (2000). Plastidial Ndh complex, 17th Photosynthesis Congress of the Universities Mainz, Frankfurt, Karlsruhe, Konstanz and Freiburg; Institute for Physical Chemistry, Freiburg, Germany.

1.  Darie C. (1999). Isolation, cloning and expression as fusion proteins of the ndh genes of the Ndh complex (NAD(P)H:plastoquinone-oxidoreductase) from mesophyll cloroplasts from Zea mays, Department of Biology, Al.I. Cuza University, Iasi, Romania.