and its Potential Receptor Protein
Ribbon diagram of human heat shock 70kDa protein 9. B.
Schematic diagram showing the ligand (ATP) - receptor (78 kDa glucose-regulated
protein) interactions in 3LDL (Chain A). The pink circles represent
the residues participating in hydrogen bonds, as well as in charge
or polar interactions. The green circles are residues participating
in van der Waals interactions. The light blue circle surrounding
a given residue/atom denotes the latter's solvent accessible surface.
The main chain and side-chain hydrogen bonds are indicated by green
and blue dashed arrows. H-bond with water is depicted in black arrow.
Pi interaction and charge interactions are colored in orange and
pink dashed line respectively. Water molecules are displayed as
cyan sphere. C. MD simulation of TDF protein (water
molecules are not displayed).